Basic Information

Transcription Factor Domain

TF Family: CG-1
Domain: CG-1 domain
PFAM: PF03859
TF Group: Unclassified Structure
Description: CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 6.1e-17 8.9e-13 49.2 1.8 40 79 2 40 1 50 0.93

2 2 0.0049 72 4.4 0.3 63 75 216 228 206 228 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	6.1e-17	8.9e-13	49.2	1.8	40	79	2	40	1	50	0.93
2	2	0.0049	72	4.4	0.3	63	75	216	228	206	228	0.83

Coding Sequence: ATGCTGCTGTACAGCCGAAAGAAGGTGCGCTACAGAAGAGATGGATACTGCTGGAAGAAGCGGAAAGACGGAAAGACCACGCGGGAAGACCACATGAAACTGAAAGTCCAGGGCACAGAGAAAAGATGGATACTGCTGGAAGAAGCGGAAAGATGGAAAGACCACGCGGGAAGACCACATGAAACTGAAAGTCCAGGGCACAGAGGTAAGTCCAGGTTTATGGTAGTATTGTTGGAAGTAGGTGTGCTACAGAAAAGATGGATACTGCTGGAAGAAGCGGAAAGATGGAAAGACCACGCGGGAAGACCACATGAAACTGAAAGTCCAGGGCACAGAGGTAAGTCCAGGTTTATGGTAGTATTGTTGGAAGTAGGTGTGCTACAGAAAAGATGGATACTGCTGGAAGAAGCGGAAAGATGGAAAGACCACGCGGGAAGACCACATGAAACTGAAAGTCCAGTGCACAGAGGTGTGCTACAGAAAAGATGGGTACTGCTAGAAGAAGCGGAAAGACGGAAAGACCAAGCGGTAAGACCACATGAAACTGAAAGTCCTGGGCACAGAGGTAAGTCCAGGTTTATGGTAGTATTGTTGGAAGTAGGTGTGCTATCGAAGAGACGGGCACTGCTGAAAGAAGCGGAAAGACGGGAGAACACGCGTGAAGACCACATGAAACTGAAGGTCTAG
Protein Sequence: MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEKRWILLEEAERWKDHAGRPHETESPGHRGKSRFMVVLLEVGVLQKRWILLEEAERWKDHAGRPHETESPGHRGKSRFMVVLLEVGVLQKRWILLEEAERWKDHAGRPHETESPVHRGVLQKRWVLLEEAERRKDQAVRPHETESPGHRGKSRFMVVLLEVGVLSKRRALLKEAERRENTREDHMKLKV

Sequence clustering based on sequence similarity using MMseqs2