Scos031377.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- Znf541
- Assembly
- GCA_949820665.1
- Location
- OX463314.1:12361040-12369859[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-09 3.1e-06 28.4 0.0 2 46 654 698 653 698 0.96
Sequence Information
- Coding Sequence
- ATGGACTGGATAACTGAACTGTTTCAACCGACCAACCTCAATAAACAGAAGGCGCAGCAGGGTAGTCAAAAAAGTGGGAGTGGTGCCAGTACGAGCGGCGCAGCCAGCGGAGCCACGAGCGGAGCGGGAGCGGGTCTGCCCCGAGTGCCTGAAGCGAAGCCAGTCGAGTGCAATTTGTGTCATCGCAAGTTCAAGAACATACCAGCTCTCAATGGCCACATGCGGCTACATGGAGGATATTTCAAAAAAGATTCAGATAACAAGAAATTAGATAAAAAGGAATCTACAGGCCCTCCGCTTCAAACCGCGTCAGTGTCTGTTCGGGCACTGATTGAAGAGAAGATCATTAGTCGACGCGGAGCAACAGTAGCATCCACTTCTACTGCAGGAACAAGTTCAGACTCTGTAGCCACACGAACAGGGTTCGTAGCACCCGCACCGCCTCCGTTGTCATCAATCCGTACGTCAACTTCACCAGCCTCACCCGCTGCCACATCTAGTCAGTTCGTCTCACCGCGAGCACCGCCCGTCGTCACTGTAGCCACAAACTCCGCAAACATCGCCGCTTCTCACAGGGACTCCACCCTAATTGAGCTCTTGAAGAAAGGAAACTCAAAGGTCGTAAAGAGATCAGCGTCGGACCCGGGACAGTCATCTCCGCAACAAGAGTTCACTTTTCGACCTGACCTTTTTGGGGTTTCATTCAATTCCGATGATGGATATTTCTCGCCAGCTCTGAATGAGGATACGTTCCAGTTTACAACAACCCCCGACCATCTTGATGAGCTTGCGTCTTTGGAAGATTACGCTACAGTTGCTGCTTCTATAAGAGAACGATCTCCTGTTACCTTCCCGTCCAGTCGACGGCTCGCCGCCGTCTTGAATTCACCGCTACCAGAATCGTTGGCTGATTTTGGAGCTTGCCATGGCGGATCTCCTGTTCCATCTCCTGGTATTGGCTACACAGCAAACTCACCGGGTTTATCATATTCTACTGGAGATTCTCCAGGATTGGCTTACGCAGCGTCACCAGGAGGAAGCTATTCGACACAGCCCGAGTCATCGCCAGGACTGGCTTACCCCACACCCCCAGCATCCCACGATGCACACTCACCAGCGCATACCGTTCCACGTGCGTCTTCACCACTGTCTGCTGCCTTTTTCACTGCTACGATGTCTAGTCAAGAAGAGGTGGAAGAAGCCTTAGAAGAGGTCCTGCCAGAAGAATGTAGATCTCTTGATGCCTATGCCTTAGAACCCTCGCCAGCACCGCGGCGAATCATGCTCAACTCTGAAGACCCGCTTCTATCGAGCAGTCCTCGTGACTTCTCTCATCAGCGGCCAATACGTCGCCAACATCGAATTCTGACAACCATGCCGTCCATGCCGTGGCAGAATGATACATCTTCTCTGCAGGTATGCGTGGAAGGTCGAGATACGGTTCCAGCAGTATTCCTGAGCCCTAGCAGCGTACCAGCGTCACCTCAGCGGCGCAAACGACGGGCGTCACCAGCCGGGCCGTACCGCTCTCGCATGCGCCGCTCTATAAACCACTTCACACCGCAGCCGATACTGCCCCCTGATAGGGACGGTGTTGGCTTGTTCGTAGAGCTTGCTGCAGGGCTATCAACAGAGACCGACGTCCTATCCCAGCTGGAGGAGCCCAGACCACCTCAGATCAACATCGGCAGGGACCACCAGGCCGATATCCCAGAGCTGTGCAACGATCGCATGGATCTACATCGAGTGCCCGAACAGCTGCTctgggaccccggcatcaacgACACGCTGGATGACAATGAAGTGCGCATGTTCATGGAGCTGGCGATGTGCGCGGCGATGCCGGTGGGCGGGCACACGCGCGAGTTCGCGCTGCAGACGCTGGGCGAGTGCGGCGGCGACATCCGCGCGGCCACGCTGCGGCTCATGTCGCGCCCGCCAGCCCCGACGATACACGAGCCACGATGGACGCCTGAAGAAGTCGAGGCCTTCTTAGCAGGCCTGGGGCACTACGATAAGGACTTCTACAAGATTTCGCAGCTGatAAGAACAAAAGACTCGAAGCAGTGCATCCAGTTCTACTACTTCTGGAAGAAAGTGACCAAAGATTACAAGACGCTGTTTCTGCGGAGCTGGCACATGGAGCAGGCATCACAAGGTTCGGTAGGGCAGGTAGCGCCGGTCGCCGCGCACGTGACGTCATCGCCCACCGCCTTCGACGCCGACGAGTTCCCTTGCAAGATCTGCGGGAAAGTATTTAACAAAGTAAAAAGCCGTAGTGCACACATGAAGTCACACCGGCCACTCGACGCCGAGCCGAAACGGCCCAAACTCGAAAAGCCTTATGAAAAGGTCGAGAGATCCGATGACAGACCCTACTCGTCAGCTGAATACCAAATAAGCAAAACGCCTGCAATGTAA
- Protein Sequence
- MDWITELFQPTNLNKQKAQQGSQKSGSGASTSGAASGATSGAGAGLPRVPEAKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDNKKLDKKESTGPPLQTASVSVRALIEEKIISRRGATVASTSTAGTSSDSVATRTGFVAPAPPPLSSIRTSTSPASPAATSSQFVSPRAPPVVTVATNSANIAASHRDSTLIELLKKGNSKVVKRSASDPGQSSPQQEFTFRPDLFGVSFNSDDGYFSPALNEDTFQFTTTPDHLDELASLEDYATVAASIRERSPVTFPSSRRLAAVLNSPLPESLADFGACHGGSPVPSPGIGYTANSPGLSYSTGDSPGLAYAASPGGSYSTQPESSPGLAYPTPPASHDAHSPAHTVPRASSPLSAAFFTATMSSQEEVEEALEEVLPEECRSLDAYALEPSPAPRRIMLNSEDPLLSSSPRDFSHQRPIRRQHRILTTMPSMPWQNDTSSLQVCVEGRDTVPAVFLSPSSVPASPQRRKRRASPAGPYRSRMRRSINHFTPQPILPPDRDGVGLFVELAAGLSTETDVLSQLEEPRPPQINIGRDHQADIPELCNDRMDLHRVPEQLLWDPGINDTLDDNEVRMFMELAMCAAMPVGGHTREFALQTLGECGGDIRAATLRLMSRPPAPTIHEPRWTPEEVEAFLAGLGHYDKDFYKISQLIRTKDSKQCIQFYYFWKKVTKDYKTLFLRSWHMEQASQGSVGQVAPVAAHVTSSPTAFDADEFPCKICGKVFNKVKSRSAHMKSHRPLDAEPKRPKLEKPYEKVERSDDRPYSSAEYQISKTPAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01534434;
- 90% Identity
- iTF_00178807;
- 80% Identity
- iTF_01337411;