Scos020069.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- F54F2.9
- Assembly
- GCA_949820665.1
- Location
- OX463306.1:3564478-3580468[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-05 0.017 16.5 0.0 2 34 293 328 292 334 0.84 2 2 2.9e-09 4.8e-06 27.8 0.0 3 43 375 420 374 422 0.89
Sequence Information
- Coding Sequence
- ATGCGTTGGGAAGTGCTGGTGCTGTGTGGCCTGGTGGTGTGCGTGTCTGCGTGGGACAATGACGATCTCGAAGTGTTTGACGTGGTGGAAGAAGTTAATCAGAACTTCTACGAATTGATGGGAGTTTCGCAGGAAGCGTCTCAATCGGAGATCAAGTCTGCATTCAGACAGTTGACTCTTAAGTTGCATCCAGACAAGAATGATGCACCGGACGCTGATGTTCAATTCAGGAATCTAGTCTCTGTACATAATATATTGAAAGACCCGGGAAAGAGAGAGaaGTACAATGAAGTACTCAAGAATGGTCTACCTAACTGGCGGTCAGCTATTTACTACTACCGTCATGTCCGCAAGATGGGGCTGGCCGAGGGTGCTCTTATCTTGTTTATCATCATCACATTCGGACAGTATCTTGTTGGCTGGGCTTCATATGCCGAGAAGAGATATACAGCAGAGCAGTTACTAAACGCTAAGACCAAGAAGAATAAAAAGGCTACTGAGCTTGATTTGGCTATGACTGAATATCTAGAGCAGCTCCCAAAACCAAGCATAATGAACACATTGCCATTCCAAATACCAATGTGGACGTGGGCTGCGATCACGGCTCTACCTAAAGCTATTGCAGAGTACAGgaggaagaaaaaagaagaggaagaagaagcgagacgacagaaaaagaaGGAAGAAGAGGAAGAGAAAGTCAGGCAGGAGCGTGAAGCGGCGCTGGCCGAGTTCCGCGAGAAGGGAGGCGCGCGGCGCAGGCGCGGGTTCGTGCCCGCTGAGAGAGATTGTCTGCTGGACTCTGCTGATGAGCCCGCGGGCGGGGAAGAGGCCAAACCTGTTAAAGCGGCGCCTGCGCCTCCAGTAATAACTGGCGGGCTATGGACGGACGACGACCTGGCCGAGTTGGTCCGCCTGGTGAAGAAGTTCCCCGGCGGCTCGCCCGAGCGCTGGGAGAGGATCGCCGAGGCCATGTGCCGCTCCGTCGGAGAGGTCACGCACATGGCCGCCAAGTTGAAGGAGAACTGCTATAAGGTGCCGGGACAGGAGGCGGAACCGGTGGTCCCAGAACCGCCTAAAAAGGTGAAGACCCGTAAGACAGAGGACGTGTCAGCGGCGGCGAACTGGTCGCAGCCGCAGCAGAAGGCGCTGGAGACAGCTCTAGCCAAATATCCTAAAGGCAGCGCCGGCGACAGGTGGCAGAAGATCGCTAGTGCTGTGCCCGGGAAGACCAAGGAGGAATGTATGCAGAGGTGTAGGTACTTATCAGAAATGGTgaagaaacaaaaacaacaagAGGAGGAGACTCAATTAGGTAACGGTGACTGTGAGCCCACATTGAGTGAAGATATCACCTCATAA
- Protein Sequence
- MRWEVLVLCGLVVCVSAWDNDDLEVFDVVEEVNQNFYELMGVSQEASQSEIKSAFRQLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGALILFIIITFGQYLVGWASYAEKRYTAEQLLNAKTKKNKKATELDLAMTEYLEQLPKPSIMNTLPFQIPMWTWAAITALPKAIAEYRRKKKEEEEEARRQKKKEEEEEKVRQEREAALAEFREKGGARRRRGFVPAERDCLLDSADEPAGGEEAKPVKAAPAPPVITGGLWTDDDLAELVRLVKKFPGGSPERWERIAEAMCRSVGEVTHMAAKLKENCYKVPGQEAEPVVPEPPKKVKTRKTEDVSAAANWSQPQQKALETALAKYPKGSAGDRWQKIASAVPGKTKEECMQRCRYLSEMVKKQKQQEEETQLGNGDCEPTLSEDITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00275214; iTF_00178108;
- 90% Identity
- -
- 80% Identity
- -