Scos029207.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- dnajc2
- Assembly
- GCA_949820665.1
- Location
- OX463312.1:18000295-18002558[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00028 0.47 11.9 0.0 2 32 434 468 433 471 0.85 2 2 8.5e-13 1.4e-09 39.1 0.2 2 44 561 607 560 609 0.90
Sequence Information
- Coding Sequence
- ATGAGTGAGGGGGAGAATAATAACGAATGTCGGGTGGTGGCAATACCCCAGCTGTTCGTGAAGAGAAAAGTAGAATGCGCTGGAGCCGCGTTTCTGAGATATTACAAGATCAAATGTCACGGGGAGGACGAGCTGCTGGACACgtcaaattcaaaagaaaagGCCGAAGAGGTCACCTTCGACGACGACGTGGAGTACCTGCGCAGCCTGGACCCGAAGGAATGGAAAAACCAAGACCACTATGCAGTGCTGGGTATGAAAAACCTTCGTAACAAAGCCACCGAAGACGATATCAAGCGCGCTTACCGCCAGAAAGTGTTAAAACACCACCCTGACAAACGCAAGGCTCAAGGAGAAGAGATACGCAGCGACGACGACTATTTCACTTGCATTACTAAAGCTTACGAGATCCTCGGCTCACCAGCTAAACGAAGATCTTATGACTCAGTGGACCCGCTCGTTGATGACAACATACCAAGCGTAGCTGAAATTAAGAAAGATGGTTTCTTCAAAGCATTCACTAAAGTGTTTGAGATTAATTCCTGCTGGTCGGAGAAGAGAAATGTGCCTTTGCTAGGTGACGAAAACAGTCCTAGAGAACAAGTTGAAAGATTCTATGCCTTTTGGTACGAGTTTGATTCCTGGCGTGAGTTCTCTTACCTTGATGAAGAAGAGAAAGAAAAGGGAGCAGATAGGGAAGAGAGAAGATGGATAGAGAAGCAAAACAAAGCTGCGAGAGCCAAGCTAAAGAAGGAGGAGATGACTAGGATACGTAGCTTGGTTGATTTGGCTTACGCTCACGATCCCAGAATACAGCGGTTCAAGCAAGAGGACAAAGACAAGAAGTTGGCTGCTAAACAAGCAAGACAGAATGCAGTTCAAGCCAAGAaagcagaagaagaaagacTCATCAAGGAAGCCCAGCTCGCCAAGCAGAAGGTAGAAGAAGCTGAACGGGCCAGGATAGAAGCAGCACGTGCTGAACGAgaacaacagaagaagaatcttcGCAAGGAACGCAAGGCCCTCAGGGACATGTGCAAAACTAACAACTACTTTGCTAAGAATGAAGAAGAAACAGTCTCCCACATGGCTTCAGTTGAAAAAATCTGTGAACTCATGAAAGCAGTTGAACTACAAGATTTTATGAAAGATTTAGAAGCTAACGGAAGGAATTCTTTCCTCAAAACTGCTCAAGAAACTGAGGATAAATTGGAAGAAGAACGCCGAGCTCTCTTTGAAACTAAGAAAGAAGAAACACAGAAAAGCAAACCAAAAGAATCAGCTGTACGTACACCTATGGAATGGACTCCCGAGATGATGCAAATGCTGATCAAAGCTGTAAACTTATTCCCAGCTGGCACCAATCAGAGATGGGAAGTAGTTGCGAATTTCCTTAACCAGCACTGCACTTTCATAGATGATAAACGGTTCAATGCAAAAGACGTTTTGAATAAAGCAAAGGACTTGCAAAGCTCCGATTTTTCAAAGAGCAGCCTAAAGAAAGCGGCTAATGAAGAAGCATTTGACACATTTGAAaaagacaagaagaaaattGCCGCCCATGTAGATGACAGTGGCATATCCCAAAATGATCCCGGTGTTAAACTAGTTAACGGAATTTCTAAGCCCAAAATGAATGGAGAAGTTAAACCAGAGAaggagaaagaaaaagaagataagCCATGGACTAAGACCGAACAGGAACTTCTTGAACAAGCCATGAAGACGTTCCCATCTAGCACACAGGAGCGATGGGACAAGATTGCCGATTGTATTCCGAACCGTAGCAAGAAAGACTGCATGAAACGTTACAAGGAGCTTGTAGAGTTAGTCAAAGCGAAGAAACAAGCCACCAACCTGTCCAAATAA
- Protein Sequence
- MSEGENNNECRVVAIPQLFVKRKVECAGAAFLRYYKIKCHGEDELLDTSNSKEKAEEVTFDDDVEYLRSLDPKEWKNQDHYAVLGMKNLRNKATEDDIKRAYRQKVLKHHPDKRKAQGEEIRSDDDYFTCITKAYEILGSPAKRRSYDSVDPLVDDNIPSVAEIKKDGFFKAFTKVFEINSCWSEKRNVPLLGDENSPREQVERFYAFWYEFDSWREFSYLDEEEKEKGADREERRWIEKQNKAARAKLKKEEMTRIRSLVDLAYAHDPRIQRFKQEDKDKKLAAKQARQNAVQAKKAEEERLIKEAQLAKQKVEEAERARIEAARAEREQQKKNLRKERKALRDMCKTNNYFAKNEEETVSHMASVEKICELMKAVELQDFMKDLEANGRNSFLKTAQETEDKLEEERRALFETKKEETQKSKPKESAVRTPMEWTPEMMQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRFNAKDVLNKAKDLQSSDFSKSSLKKAANEEAFDTFEKDKKKIAAHVDDSGISQNDPGVKLVNGISKPKMNGEVKPEKEKEKEDKPWTKTEQELLEQAMKTFPSSTQERWDKIADCIPNRSKKDCMKRYKELVELVKAKKQATNLSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00006232;
- 90% Identity
- iTF_01501068; iTF_00844299; iTF_00275215; iTF_01403385;
- 80% Identity
- -