Scos034239.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949820665.1
- Location
- OX463317.1:3940783-3978012[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-15 1.4e-12 48.3 0.0 1 38 291 329 291 333 0.94 2 2 2.3e-18 2.3e-15 57.2 0.0 1 43 495 538 495 540 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAAATCTACCAGGACGGATTAATACCAAAACGGAACGACGAGGTGTCCAGCGACGAGGATTCCACGCCTTCCACCGACCCCCCTCCCGCGCTCAAGATAAAGACCATCGAACAGATAAACGCGCCCGAAGACGCAAGCCCCAAGGAGGGGAGCAATACCGAGGAGAGAGCCGCGCCAAGACGGCCGCAGACCATACTCGAGAGTTTGATAAAGCAGCCAGCGACGCAGCCAAAGTTGGAGTCAGAAGAGCCGACGGATTGGAAACCAGCGGACAAGTGCTACTTCTGTGTAGACGGAGAACGACCAGAGGGTGCGGAGAATCAAACAGGCAACAATATGGACCTAGGCCACCTCTTGTCGCGGGATAACGGGCTATCGCGGGACGACACGGGAAACGCCGCGGGCAGGAAGAGTCCAGCGTCGGAATCGGACAGCAGTTCAGTCTCGGGGGCGAAGTCTCCGGGGGTGGCGCCCTCGCTGCTGCAGCACTTCATGTCAATGCAGGCGCAGAGCCCGCAGGCGATCGCTCAGGTACAAGTTGAGCAGTTCCAGCAGATGTTGGCGACGTTAGCAGCGCTCGGGTCAGGACTGGTGCCACCGGCGCTGACGCAGGCGTGGGTGATGCAGCGGCTGGCGCAAGCGAGGCAGCCAGATAGGCTACCAGAAGTGACAGAGAAGGTGCCTCCGCCGAGCTTGTCTCCCAACACTACGGAGCAACCACTGGACCTGAGCGCCAAGTCTACATCCAGCACCAGTGGCACTCCACCGCCTGACATCAAGCCCATCGATCCTGCTAGGTTGAAACGCGCTGCTCTAGAAACGACCAGCAATAGCGGGGCTCGACGCACGTACACAGAAGACCAGCTGCAAGCGGCCCTGCGAGACATAGCGTCCGGCAAGTTGGGCACCCGGCGAGCGGCCGTGGAGTATGGTATCCCGCGGTCTACTCTGAGAAACAAGGTCAACAAGTTCGGCCTCCAAGACCACCACGATTCGGAGCCTGATAGTGACCCGGAGCGTACGGAATCGCCGCCAAGTGTCATCCTCAAAATACCCACCTTCCCACCACCAGACGAAAAGTCACAGTCCCCAGCAACGCCTGTTACGACCCCGGTAACTCCAATCACGCCGCTCCTACAACACCAGCCCCATCTCAATCCACCGTCTCAACTGCTACTTCCGCCGTCAATCTACGACCAGCCCTCACCGCAACATCTGTTCACTTCGTTGAGCGATGTCATAGCGAAGAGTATTAGCCAGAAATTTTTAGACAGGCCCATGGACAGGCCTCATAATGATATGTCGTTCATGAGACCGGATAGGCACGTGTCCGTTATTAAAACTCCGCCGGATAATAGGAACTATCCAGCCCCGAGTAATTCCAGGCAGCAGCCGAACAACAACGGGCAGCCGGCGGCGGGAGGCAAGGGGACCAGGCCCAAACGAGGCAAGTACAGGAACTACGATCGCGACAGCTTAGTGGAAGCCGTTAAAGCTGTGCAGCGAGGCGAGATGTCCGTGCACAGAGCCGGCTCGTACTATGGCGTGCCTCACTCGACCCTTGAGTACAAGGTGAAGGAGCGGCATCTAATGCGGCCGCGGAAGCGAGAGCCCAAGCCCCAGCAGGACATGACCAAGCCTCAGCCGCCAAAGCCCGTTCAGCAGAAACCGCCGACGAAGCCGTTCACGAACGGCATGAACGGGCCGGACACGCCGGGCTACCCGCCCGGGTACCCGTTCTGGCCGGGCGCGCAGTtcgccccgccgcccgcgcccgacCTGTACGCGTCGCACATGATGCGCCGGCTGCGCGAGGAAGCGCCGCCGCCGGCTAATGGCTCCTTCCTCGAGGGCATCATCCGGTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACCGCAGAGCCGCGGCCGATGCCGCCGACCGAAGCCCCGAGCCTGCTGCGGCGGCTGGCGGGGGAGCCGGACGACCCGCCGCCGGTGCGACGCCCGCGCCTCGACAGCTCCTCCGACGTCCAGCTCGCGGCCGACCTCCGAGAAGTTGTGCAGAGAATCCGCGCTCAGGACAAGATGAGGCCTAGGAACGGGACGCCGACGCCGCCCGGGCAGCCGGCGGACCCGCAgtcgccgccgcccgcgccccccgcgcccgcccccgccccgcccGACCGCGCCTAG
- Protein Sequence
- MGRRKWKIYQDGLIPKRNDEVSSDEDSTPSTDPPPALKIKTIEQINAPEDASPKEGSNTEERAAPRRPQTILESLIKQPATQPKLESEEPTDWKPADKCYFCVDGERPEGAENQTGNNMDLGHLLSRDNGLSRDDTGNAAGRKSPASESDSSSVSGAKSPGVAPSLLQHFMSMQAQSPQAIAQVQVEQFQQMLATLAALGSGLVPPALTQAWVMQRLAQARQPDRLPEVTEKVPPPSLSPNTTEQPLDLSAKSTSSTSGTPPPDIKPIDPARLKRAALETTSNSGARRTYTEDQLQAALRDIASGKLGTRRAAVEYGIPRSTLRNKVNKFGLQDHHDSEPDSDPERTESPPSVILKIPTFPPPDEKSQSPATPVTTPVTPITPLLQHQPHLNPPSQLLLPPSIYDQPSPQHLFTSLSDVIAKSISQKFLDRPMDRPHNDMSFMRPDRHVSVIKTPPDNRNYPAPSNSRQQPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDMTKPQPPKPVQQKPPTKPFTNGMNGPDTPGYPPGYPFWPGAQFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPMPPTEAPSLLRRLAGEPDDPPPVRRPRLDSSSDVQLAADLREVVQRIRAQDKMRPRNGTPTPPGQPADPQSPPPAPPAPAPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01403361;
- 90% Identity
- iTF_01501025;
- 80% Identity
- -