Scos021765.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- kn
- Assembly
- GCA_949820665.1
- Location
- OX463307.1:8338068-8350353[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-141 2.9e-137 459.7 0.0 183 387 60 282 52 285 0.98 2 2 8.6e-08 0.00076 19.2 4.0 421 469 292 342 283 435 0.63
Sequence Information
- Coding Sequence
- ATGGTTTTTGATCTAGATATAGAGCTGATAGTACCACCTTTGAATATGTTAGGTGCGAAGACTTTTGACGTTCGATATCCAGACAACAAAAGGAAGAATTCAGTGCTAGCTCTCTACACATCCACATCTGTTGGCACAGCAATATTCGGCGTGGCATCGCCGCCGCCGGAGGCTATaTTTTTTCTTAAGTTCTTCTTGAAGTGCAACCAGAACTGCTTGAAGAATGCTGGCAACCCGAGAGATATGAGGAGGTTTCAGGTGGTGATATCAACGCAGGTGATGGTGGACGGCCCCCTACTGGCCATCTCGGACAACATGTTCGTTCACAACAACAGCAAACATGGCCGCCGCGCGAAACGGCTGGACCCCACTGAAGGTATTGAGCCAGCGCCTGAACCTTGCTCGGGTCTGTACCCACCGTTGCCTGTCGCGACTCCTTGCATCAAGGCGATATCTCCGAGCGAAGGGTGGACGTCAGGTGGCTCTACTGTAATCATAGTTGGGGACAACTTCTTTGACGGCCTACAAGTCGTCTTTGGAACTATGCTAGTTTGGAGTGAGTTAATAACCTCGCATGCGATACGAGTACAAACGCCGCCTCGACACATACCGGGGGTTGTAGAAGTAACGCTCTCTTATAAGAGCAAACAGTTCTGTAAAGGCGCGCCAGGGAGATTCGTTTATGTTTCAGCTCTCAACGAGCCCACGATAGATTACGGCTTCCAGAGGCTACAGAAACTTATACCGAGGCATCCTGGCGACCCGGAAAAGTTACCAAAGGAAATCATCCTCAAGCGAGCAGCGGACCTAGCAGAAGCTCTATACTCGATGCCTCGGAACAACCAGCTGGGTCTGGGCGCTCCACGGTCACCTCCTTCGAGTATGCCCTTCAACTCATACACCGGTCAGCTGGCCGTCAGCGTGCAGGACACGGCTGCCAGCCAGTGGACTGAAGAAGAGTACGTGCGCAGCGGCGGGTCGGTTTCACCCAGATACTGTTCTGCCGCGTCCACCCCTCACGCCGCTCCGGCCGCCTACCCTCATCCGCAGCACTACCCAGCACCACCGACCTCACTCTTCAATACCAGCTCACTGTCTCTCGGCCCGTACCACCCAGCCAACGTGAATGGACACTTATCTGACCACTATAACGTGTATAACACGAAAGATAGCGGACATTATGAAAGAAATTCTAAACCGTCCGACTGTCCTGTAAACACTCATTCGAGAGAAATGAAAGAGGATAAAGGCAAGAGGAGCGCCTTTGCCGTTGTGAGGCATAGTCCGCCCCAGACGCCGCATAACTGGCAGCTCGCTGTTCAATGTTAG
- Protein Sequence
- MVFDLDIELIVPPLNMLGAKTFDVRYPDNKRKNSVLALYTSTSVGTAIFGVASPPPEAIFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIEPAPEPCSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYTGQLAVSVQDTAASQWTEEEYVRSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTSSLSLGPYHPANVNGHLSDHYNVYNTKDSGHYERNSKPSDCPVNTHSREMKEDKGKRSAFAVVRHSPPQTPHNWQLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00177866;
- 80% Identity
- -