Scos004613.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- -
- Assembly
- GCA_949820665.1
- Location
- OX463296.1:18737071-18739375[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 2.3e-05 25.6 8.5 4 63 397 456 394 458 0.94
Sequence Information
- Coding Sequence
- ATGTCCTGGACCACACCCAGCTTTGCGGAGGGATACTTGAAACCAGAACCTCTTCACGAAGACAACATGTTCAACGAGATGGACTGCGAGTTCTTCCAAGAATTGGAGCAGTGGTGCCCAGAAACCACGAAAGTAGAGCTGCCAGCGATTGATACCCCCAAGAAGCGTGAAGAAACCTCACACAACACCGACACACTACACACAACATTCTCGCCCCAAAGCTGGGATGTCATAGACGCTATTTCCCCCGGTCAGGCAGGACTATACTCTTCTACACCAAATGATCCATTATCACCAAATATGGATGGATTTTCATCCATTGacagtaaatttttgtttaacTGTGATACAGTCAATGAAagtaaaatagaaaattttGATTCGAATTTAGACATACTGAACCTGCCGGTAGTTATAGGAAATATTGCGTCTGAGGAGATGATCGATTTGAACCCGCAAAACGTGGCGCCATTCGATTACTATAATATAAACACAACACAAAACACGGAGTACATTCCTAcaacaaacacacacaaaatGTTTTTACACGCTGTTGATGAGGAGGATTCCATCGACATGAAGTTAGGCTCTGTCGTAATGGGAGACGTTGAAAACGACGTAGTAGTTTTCAACAAAGAGGGGACTCAAGAAGCGAAGATTAGACCGACCCAACATCTATCATTAAACGTCTCAACAACACCTGCGCAGTGGTCAAGCGCAGCAATCAACACCCCAGACATTCTCAGCTATGTCGAGCAGTTggagaaagaaaaatatcctCCAGTTACAATGCCGACTCAAGCATACACATCATCGGATACTGGATTCAACTCAATAAGTTCTTGCCCCTTGGCAGTAGAATCGTCGAGTCTCTTCGAATCTGCTAGTCCGAAAAGTGAAGTTCACGTAGAATCAGAGGTGGATGACACCAGCACTTGCACAGGACGAAGAAGAAAACGACGCAGCAGTGAAGATTCAGATGAAACATATACACCATACAAAGACGAGGCACCTCGAAAGAAAGGAAGAAGATCAAACATGCCCATAAACGAGATGATACAGGCTTTGGAAGAATCACAACAAATCCCGAAAGCGCGTAGAGGTCGCCCACCCAAAAGGAGAGACAGTAATGTCTCTTCAGCTTGTAGTATAGATGATAATACATCATGTACATCTATACACGATTACAGATATAGAACACTaagagataaaaataatgtagcATCAAAAAGATCAAGAATGAACAGAAAGCTAAAAGAACTTCAAATGGAACAGCTTGCAATAGAGttggaagaaagaaataaaaaactaaaagttaAGGCAGACATACTCGAAGACATGACAAAGAGATTGAAAGATGCGCTAATGACAGCTATTATACAAAAGTAG
- Protein Sequence
- MSWTTPSFAEGYLKPEPLHEDNMFNEMDCEFFQELEQWCPETTKVELPAIDTPKKREETSHNTDTLHTTFSPQSWDVIDAISPGQAGLYSSTPNDPLSPNMDGFSSIDSKFLFNCDTVNESKIENFDSNLDILNLPVVIGNIASEEMIDLNPQNVAPFDYYNINTTQNTEYIPTTNTHKMFLHAVDEEDSIDMKLGSVVMGDVENDVVVFNKEGTQEAKIRPTQHLSLNVSTTPAQWSSAAINTPDILSYVEQLEKEKYPPVTMPTQAYTSSDTGFNSISSCPLAVESSSLFESASPKSEVHVESEVDDTSTCTGRRRKRRSSEDSDETYTPYKDEAPRKKGRRSNMPINEMIQALEESQQIPKARRGRPPKRRDSNVSSACSIDDNTSCTSIHDYRYRTLRDKNNVASKRSRMNRKLKELQMEQLAIELEERNKKLKVKADILEDMTKRLKDALMTAIIQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -