Scos027217.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- -
- Assembly
- GCA_949820665.1
- Location
- OX463311.1:3464491-3465159[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 6.4e-07 30.5 3.6 3 47 163 207 161 210 0.94
Sequence Information
- Coding Sequence
- ATGTCGCTCTGGACCCCTTACGCCGAAGCGCCTCTCGACTTGAGCAAAGTGAAAGACGAACGCTACACTCCTGAAGAGAATGTTCCCAATCTTACTCCCATGGATTACTACAGTGCTGGTTATCCTCAGCCGTACCTTTCGCCGCCTATCCAAGAGATCGCCCAGCCGGTGCCGTACTATCCATATGCATACCAGCCATATGTGGTACCTTCAGCGCAAATGTCGCCCGTGTCCGCTGCAAGTAACTGTTCCTATGACGTCAGAAGTCCTGTCGACTACCGCCCGCAGACGCTTTCACCGCCGGAATCTCCACCGTCCATCAAAGCAGCAAACTACATAGCAGAAGCAGACGTTTTGTCCGACGATCCAGACTTCCAAGCCTTCGAGCGTGATGCGCTGCGAGCGATGGCCGAGAAGAATGGCGGCACGTTGCTAGGCAACAACCCGCGCATGCGTCGTGCCGTCCAGACTACCCTAGCCGTCGACGATTCGTACAGAAAGCAGCGCGAGCGCAACAACTTCGCCGCCAAACAGTCCCGTGATAGAAGGAAGCTGAGAGAGATACACTTGGCCTTAAAAGTGGCGTATTTGAAGAACGAAGTGACCAAGCTTAAGGCCCAGCTCTCTGTTACTACTTGCAGCGGCTGCCACAGATTCTGTGATTGCTGA
- Protein Sequence
- MSLWTPYAEAPLDLSKVKDERYTPEENVPNLTPMDYYSAGYPQPYLSPPIQEIAQPVPYYPYAYQPYVVPSAQMSPVSAASNCSYDVRSPVDYRPQTLSPPESPPSIKAANYIAEADVLSDDPDFQAFERDALRAMAEKNGGTLLGNNPRMRRAVQTTLAVDDSYRKQRERNNFAAKQSRDRRKLREIHLALKVAYLKNEVTKLKAQLSVTTCSGCHRFCDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01500855;
- 90% Identity
- -
- 80% Identity
- -