Scos038015.2
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- cnc
- Assembly
- GCA_949820665.1
- Location
- OX463322.1:6362851-6392247[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-11 3.6e-08 34.5 8.8 3 60 441 498 439 507 0.85
Sequence Information
- Coding Sequence
- atggcggccttgCGTCCTCTCAAGGCGCAACTAAATTACACAGAGCACAACAAGACGTCGCTGATGCGGTCTATGTCTGTGGAGCAGCGGTGGCAAGACCTGGCTTCCTTGCTGACAATCCCACCACCGCCCGACCAGTACCAACATTACCACCAACACCATAACATTAGtGCCCATGGCGCGGCCGGCTACGCTCCTAACTATCATCCTCACGCGCCGATGCCACCGCCTATGCCAGAAAAACACCCGGATTCGTATGCGGGTGCCGCCGCGCCGCTAGAGGGCGCTTACAAGGTGGAATCAGCTCATCATCAACAACACGATGGTATCTACTATCAGAACTCTACATCAGAGATGGCGCCACCGCCGGCGACCAACCAGGACGGGTTTCTACAATCTATCCTGAACGATGAGGATCTGCAACTTATGGACATGGCTATGAATGAGGGAATGTACACGATGCGCATGCTCGACGGTGCGGGCCACGCGCATCCGCCGCATCACACGCACTCGCACATGATGCTCGCAGCAGAGCGCGACTCAGCGTCCGACAGCGCAGTATCCTCGATGGGCTCGGAGCGTGTGCCGTCACTCAGCGATGGGGAGTGGTGCGATGGCAGCGATTCGGCGCAGGAGTTCCACAGCTCCAAATTCCGTCCTTACGACAGTGCGTACGGACGCGAGCGCGCCGCCAACCATCAACCGCAGAAGAAACACCACATGTTCGGCAAACGATGCTTCCAAGACCAACAACAAcaccaacaacaacaacaaccgCAACAACAACCCACTTTGGAGCCCCTCGTGGGCCCGCGGGCGCCAGGGGTGGTCAAGAGCGAATGGCCGGAACATGCTTACAGGCAGGACGGATTGCACATGCACAATGGCACAGATTTCGGCGCCCGATCTCAGCTAGGCGCTCCGCCAGTCCTCCAACCAGCACTTGACCTCAACACACCTCATTCCAGCCATGCTCTACTGCAGaacgGTATATCAAGTCCAGTAGGCCCGACCAGCGCCCGCTACTCAGCCGCTTATGGCGTCCCCGAGCGAGTGAGACACAACCACACATATTCCGCGCCTTTAGTGGCCACAGACCAGCGGCCAGCGCCACCTAGGGACAAGCGAGTGCGCCGATTGACAGACGGCAGTATGTCGGACGGCGGGTCGGTGAGCGGCTCCGGACACATATCGAGGGACGAGAAACGAGCTAAGGCACTCGGAATCCCTATGGAAGTCCACGACATAATAAACCTACCTATGGATGAGTTCAACGAGCGTCTCTCCAAATACGACTTGAGTGAAGCACAGCTGTCTCTCATCCGGGATATACGCAGACGTGGGAAGAACAAGGTGGCAGCGCAGAACTGCCGCAAGCGCAAACTGGACCAGATCACGTCTCTAGCCGATGAGGTGCGGCTGATGAAAGAAAGGAAACATCGCACGCAGCGAGACCACCACACGTTGCAGGCTGACAGACAGAGGGTTAAGGAGAGATTCGCCATGCTTTATAGACATGTTTTCCAGAATCTCCGCGACGCGCACGGCCGGCCGCTCTCCTCAGCTCAGTACTCGCTGCAGCAGGCCGCGGACGGCAGCGTCGTGCTCGTGCCCAAGGCGCCCGACCAGATGAACCGGACATCAGACGATGAGGCGGACAGGAAGACTAAAAACTTCGAGCAGTGA
- Protein Sequence
- MAALRPLKAQLNYTEHNKTSLMRSMSVEQRWQDLASLLTIPPPPDQYQHYHQHHNISAHGAAGYAPNYHPHAPMPPPMPEKHPDSYAGAAAPLEGAYKVESAHHQQHDGIYYQNSTSEMAPPPATNQDGFLQSILNDEDLQLMDMAMNEGMYTMRMLDGAGHAHPPHHTHSHMMLAAERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYDSAYGRERAANHQPQKKHHMFGKRCFQDQQQHQQQQQPQQQPTLEPLVGPRAPGVVKSEWPEHAYRQDGLHMHNGTDFGARSQLGAPPVLQPALDLNTPHSSHALLQNGISSPVGPTSARYSAAYGVPERVRHNHTYSAPLVATDQRPAPPRDKRVRRLTDGSMSDGGSVSGSGHISRDEKRAKALGIPMEVHDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRLMKERKHRTQRDHHTLQADRQRVKERFAMLYRHVFQNLRDAHGRPLSSAQYSLQQAADGSVVLVPKAPDQMNRTSDDEADRKTKNFEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00177830;
- 90% Identity
- iTF_01500853;
- 80% Identity
- -