Basic Information

Insect: Scotopteryx bipunctaria
Gene Symbol: stc
Assembly: GCA_949320045.1
Location: OX439452.1:9438798-9446272[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.6 1.9e+04 -3.8 1.6 15 19 528 532 527 532 0.81

2 11 0.034 4e+02 1.5 1.4 2 10 559 567 559 567 0.92

3 11 2.6e-05 0.3 11.5 18.1 4 19 575 590 573 590 0.93

4 11 3.5e-05 0.41 11.1 14.8 1 18 626 643 616 644 0.89

5 11 3.8e-05 0.44 11.0 11.6 1 18 685 702 685 703 0.98

6 11 0.87 1e+04 -3.0 0.1 4 6 710 712 709 713 0.80

7 11 1.7e-06 0.019 15.3 10.7 1 19 744 766 744 766 0.88

8 11 2 2.3e+04 -4.8 2.2 6 10 796 800 796 800 0.94

9 11 0.017 1.9e+02 2.5 7.8 1 11 806 816 806 817 0.93

10 11 0.22 2.6e+03 -1.1 1.2 3 10 820 827 819 827 0.87

11 11 5.1e-09 5.9e-05 23.3 15.8 1 19 833 851 833 851 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.6	1.9e+04	-3.8	1.6	15	19	528	532	527	532	0.81
2	11	0.034	4e+02	1.5	1.4	2	10	559	567	559	567	0.92
3	11	2.6e-05	0.3	11.5	18.1	4	19	575	590	573	590	0.93
4	11	3.5e-05	0.41	11.1	14.8	1	18	626	643	616	644	0.89
5	11	3.8e-05	0.44	11.0	11.6	1	18	685	702	685	703	0.98
6	11	0.87	1e+04	-3.0	0.1	4	6	710	712	709	713	0.80
7	11	1.7e-06	0.019	15.3	10.7	1	19	744	766	744	766	0.88
8	11	2	2.3e+04	-4.8	2.2	6	10	796	800	796	800	0.94
9	11	0.017	1.9e+02	2.5	7.8	1	11	806	816	806	817	0.93
10	11	0.22	2.6e+03	-1.1	1.2	3	10	820	827	819	827	0.87
11	11	5.1e-09	5.9e-05	23.3	15.8	1	19	833	851	833	851	0.99

Sequence Information

Coding Sequence: ATGTCACAGTGGAACAACTCATACGCTTACAACAATCAGTACCAACAAAGCCCTAATGGCTGGAATGGTGAGCCTAACGGCCAGTATGTGAATCAAGCTTATTACTCGAGGCCTGATGCCAATGGCCAATATGTGAGCTTCAATGAGTTCCTAACGCAAATGCAAAATAGTAATGTTACTCCGCAGGCTAATCCGAATAGTTTTAGCAATGTAGCATATGAGAACTATCCTCCAACGCAGTTTAGCTATCAAAATGTACCTTCACAATCTCAAACACAAGCCAACAATTATAACTATGGGCCTTCAAGCATGCCTAATGAAGTCAATAGCTACCAAGTGAACCAACAGAGCCAGTTTAATGCCCAAACAGCAGAGCCAACAACATTCACCAATAATATGACCTTCAAATCTAACCTTACAGCAACTGCAGTTGAGTTTGTGCCAAAAAGTGCTGCTCCCATACCTTCCACTAGTAGTCAGAACATTCCAGAATCTTCCACTAGTTACAAGGATGAAAGTGATGCTAAGACTAACTACGGCAACTCATCAGATCGTAACTGGAGACAGAAGCCGAAGAGCTCTCACCAAAATAATGATGCAAAAGATGTTATACCTAATGAATATCCACAGGATAACAATAAAAGTTATGAGCGCAGTAATCGAAATCGAGAACCTGCCAATCGAAATAGTATAGCCAATGGAAAACATGAAAACAGACCCCAAGATAGTATTAATGAAGAAGCCAACACTCAAAACAATGAATCGAATATTAGAAATCAAGATTCAACCAGTAAGAGTCAAGagTCACGGTCAAATAATAGAAATCAAGAATCACGATCCAATAATAGGTATCAAGATACACGTAATGAAGTAAACCAAGAAACAAGGCAAAGAAACTATGATTCAAACAGTAAAAATCGTGAATCTCGTCAAAACTATGACGCAAATGACAGGGGCCAAGAAACTAGAGAATATGATTCAAATCGCTGTGACAGAAATGACCGTCGCAACCAATCTAAGGGTAACCCCAAACCCAAAGGAAAGGATGACAATAGGACTTTCTATAATAGTGCTATTAGCCAAGATAGTCAAGATGTTAGAAAAGGATCAAGGGTAGAAGGCTCGGGACGGGGTCAAAGAAACTGGACTGGTACACAAAGACCCAGAGGAGACCGAAACCAAGATGATGAGCAATATGCAAATAATTACCCACAGAAAGAAGATAGGATTGTAAGAGATAGACCTGAACGAACAGACAGATATGATAGGGGAGAGAGAGATAGGGGGTATGACAGGGAGAGAGGATATGATAGACAGGATAGAGACAGACCACCCAAATCTAATTTGTCTAGTCCTGCTAGGTTTAAGGGCAAACATCAGACTGatctagCTATTAAAGAAATGACACAACGGGAACGTCTCTCGGACCAACTAGACAGGGGGACACTAGAGTGCCTTGTGTGCTGTGATCGAGTGAGACAATCCGACCCAGTGTGGTCCTGCTCCAACTGCTACCACGTACTGCATCTGAGGTGTATCAGGAAGTGGGCTATGAGCAGTGTGATTGAGGGCAAATGGCGCTGTCCAGCTTGCCAGAACATAAGCAAGAGCATTCCTACTGAATACCGCTGCATGTGTGGAGCCCTGCGCTCGCCCGAGTACCAGCGCGGCAGTGGCGCCCACACTTGTGGCAAGGCGTGCCAGCGCGACCGCACCTGCCCGCATCCCTGCACGCTGCTGTGCCATCCTGGACCCTGCCCGCCCTGCCAGGCCACTGTCAACAAgcaaTGCGGCTGCGGCGCGGAGACCCGCAGCATAATGTGTAGCAGCAAGCTGCCTCAGGTGTGCGGCCGAGTGTGTGGCCGCACGCTCTCTTGCAACGTGCATTCCTGCGAGAAAGAGTGTCACGAGGGGGACTGTGGGGATTGCGACAAGACTATTACGCAAGTTTGCTACTGCCCCGCCGCGACGGAGCGCACGGTCTCGTGCACGCGCGAGACCGGCTCCAACTGTCACTGGGAGTGCGGCGAGGCCTGCGGGCGGATCCAGGAGTGCGGCGCGCACGTGTGCCGCGCGCCCTGCCACGCGCCGCCGTGCGCGCCCTGCGCCCTGCTGCCGCGCGCCGTGCACACCTGTCCCTGCGGCAAGATGCAGTTGGACATGAACGCGCGCAAAGCGTGCACGGACCCGATCCCTCTGTGCGGGAACATCTGCGCCAAGCCCCTGTCCTGTGGACCCGCTGGAGACAAGCACTTCTGCAAACTGACCTGCCACGAAGGCGCCTGTCCCGTGTGCCCCGACAAGACCCTCCTGCAATGCCGCTGTGGGCATTCGAGCCGCGAAGTGCCCTGCGCCGACCTGCCGGAAATGATCAACAACGTGTTCTGTCAGAAGAAATGCAACAAGaaATTGTCGTGCGGCCGTCACCGCTGCCGCACGTCATGCTGCGCGGCGAGCACGCACCGCTGCACGGTGAGCTGCGCGCGCTCGCTGCCGTGCGGCCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCCCGCCCTGCCCCCGCGTCAGTGAGTACCAACATACCGCGGCTTGCTGCTacactaaactaaggccttttaccatctatagtagatga
Protein Sequence: MSQWNNSYAYNNQYQQSPNGWNGEPNGQYVNQAYYSRPDANGQYVSFNEFLTQMQNSNVTPQANPNSFSNVAYENYPPTQFSYQNVPSQSQTQANNYNYGPSSMPNEVNSYQVNQQSQFNAQTAEPTTFTNNMTFKSNLTATAVEFVPKSAAPIPSTSSQNIPESSTSYKDESDAKTNYGNSSDRNWRQKPKSSHQNNDAKDVIPNEYPQDNNKSYERSNRNREPANRNSIANGKHENRPQDSINEEANTQNNESNIRNQDSTSKSQESRSNNRNQESRSNNRYQDTRNEVNQETRQRNYDSNSKNRESRQNYDANDRGQETREYDSNRCDRNDRRNQSKGNPKPKGKDDNRTFYNSAISQDSQDVRKGSRVEGSGRGQRNWTGTQRPRGDRNQDDEQYANNYPQKEDRIVRDRPERTDRYDRGERDRGYDRERGYDRQDRDRPPKSNLSSPARFKGKHQTDLAIKEMTQRERLSDQLDRGTLECLVCCDRVRQSDPVWSCSNCYHVLHLRCIRKWAMSSVIEGKWRCPACQNISKSIPTEYRCMCGALRSPEYQRGSGAHTCGKACQRDRTCPHPCTLLCHPGPCPPCQATVNKQCGCGAETRSIMCSSKLPQVCGRVCGRTLSCNVHSCEKECHEGDCGDCDKTITQVCYCPAATERTVSCTRETGSNCHWECGEACGRIQECGAHVCRAPCHAPPCAPCALLPRAVHTCPCGKMQLDMNARKACTDPIPLCGNICAKPLSCGPAGDKHFCKLTCHEGACPVCPDKTLLQCRCGHSSREVPCADLPEMINNVFCQKKCNKKLSCGRHRCRTSCCAASTHRCTVSCARSLPCGLHRCEEFCHTGHCPPCPRVSEYQHTAACCYTKLRPFTIYSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -