Sbip018219.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scotopteryx bipunctaria
Gene Symbol
nfxl1
Assembly
GCA_949320045.1
Location
OX439464.1:7093013-7095484[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.014 1.7e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 3.1e-07 0.0036 17.7 15.9 3 19 186 202 185 202 0.95
4 18 3.8e-07 0.0044 17.4 13.8 3 19 239 255 237 255 0.91
5 18 1.5e-09 1.8e-05 25.0 15.0 1 19 290 308 290 308 0.99
6 18 4.9e-05 0.57 10.6 18.7 3 19 345 361 337 361 0.86
7 18 1.1 1.3e+04 -3.3 0.5 7 11 365 369 365 369 0.87
8 18 4.8e-07 0.0055 17.1 16.3 1 18 395 412 395 413 0.97
9 18 2.3e-08 0.00027 21.2 16.9 1 19 422 440 422 440 0.99
10 18 0.0002 2.3 8.6 6.4 9 19 488 498 486 498 0.89
11 18 0.0021 24 5.4 8.6 1 12 508 518 508 518 0.96
12 18 1.5 1.7e+04 -3.7 4.4 14 18 547 551 547 551 0.91
13 18 0.24 2.8e+03 -1.2 0.3 8 12 568 572 567 579 0.79
14 18 1.9e-05 0.22 11.9 5.1 1 11 588 598 588 599 0.97
15 18 0.32 3.7e+03 -1.6 1.1 14 18 612 616 611 617 0.82
16 18 2.3e-05 0.26 11.7 13.2 1 18 628 645 628 646 0.88
17 18 2 2.3e+04 -6.5 3.4 9 13 652 656 652 656 0.71
18 18 1.7e-06 0.02 15.3 10.5 1 18 687 705 687 706 0.86

Sequence Information

Coding Sequence
ATGGCTCGCCGCTACAGGGACGTAGCGGCTAAGTTGCAGCAAAACGTGCAAAAACATCTTGCGGACATGAAGGATATGTCTTCTTCTGAGGATGAAGAGCCTTACGAGTCTAGCGTCATCGAGGGAATGTTCCAGAGCTACTGGCGAGGCGGGGGGGACACTCAGATGCTGAACAGAACCAAGAATCTTCTAGAAGAGGCTATCAGCGGCCGCTCCGTAGCATGTCTGATCTGCATCAGCTCCATCAAGCGCACCCATGCCGTGTGGACCTGCGACCACTGCTACTCGTATTTCCACCTCTCTTGCATTCAGAAATGGGGTAATGACAGTATAAGCTTACGCAGCATTGAACCCCTGGCGCCAATCAGCGTGTACAAGCCTCTGAAAATAGAATGGTGCTGCCCTAAATGTCGTAATTCATACAGCAAGGACGAGATACCTAGGAAATACAGATGTTTTTGCAGTAAAACTGATAATCCCCCAGTTCATCCTTGGCTGATCCCCCATACATGTGGAGAAGTGTGTGAAAAGAGGCTGTCCGCTGGGGACAGTTGTAAACATAAGTGTTTACTGCTCTGCCATCCGGGCCCATGCCCCCCATGTCCACAGACAGTCAACGGAATATGCTACTGTGAAAAGGAGCGGAAGAAAGTCAGATGTAGTGCTGCCAAGTGGTCGTGTGGCCAGCAGTGTAGGAAAACCTTGCTGTGCCAAACACACCAGTGTGAACTAATATGCCATGAAGGTGAATGCCCTCCTTGCACCTACTCAAGCATCCAACCCTGTCAATGCAGAGCTGAGAAGACTAAAAGACCCTGTGATGATCCCTTCTGGCATTGTAAGACTCCTTGCAACAAACCATACTCATGTGGCTATCACAAATGTGAGAAAGTATGTCATCCCGGCAACTGTGGGGAATGCCCTAACTCCGGCATGAGATCCTGTCCATGTGGAGCCAATCAGTGCTACGTCCAGTGCCCTGACACAATGGAAACTTGTCTCGGAACCTGCGGCAAGAAGCATGAGGACTGTGAACACAGTTGCCCTGAAAAATGCCACAAAGGTGTGTGCCCGCCTTGCCAAGTCTTGATCCAGAAGAAATGCCACTGCTCAACTCACACCAGATCCCTTCCTTGCAGTAAGGAGTTCAAATGCGATACCAAATGCAGAGGAACTAGGCCATGTGGAAAACATGCATGTGCAAGGAAATGCTGCAATGGAAACTGCCCTCCATGTGAAAAGGCCTGTGATAAGCCGCTGCAATGTGGCCGCCATAAGTGTACCACTATCTGCCACCATGGACCGTGCTACCCATGCCCAATGGAATCCAAAATCACCTGTCGGTGTAAGGAAACTTATGTCACTGTCCCATGTGGTAGGGAAAGGTTCACTAAACCACCAAAGTGTCACCTACCCTGCAAGTTGAAATACAAATGTGGACATATTGAGGAGAATAAGCATTCCTGCCATTTTGGAGACTGTCCACCATGCAAGGCCATCTGCTACAAAACTTATCCTAAATGTGGTCACGAATGTAAGGCAACATGTCATGAGTACAAAGCTGTGATCTTCAAACAGATTGAGAAACCTGCTACTCCCTGGGAAGTTCAGCCGCCGAAGACAAAAATCATGACTCTAGAATGTCCTCCATGTATTACTGCGGTCACTGTGGTCTGTTTTGGCGAGCATGAGACCGACAACCAACCATGTCATGCTGCAGCTCGTAGACCCTGTGGCAGAGAATGCGGGAAACCTCTAGCTTGTGGAAACCACAACTGCACCTTACTCTGTCATCTTTACAGCCCCGATCCAAACTACCCAAACATACCTCACAATTGCAAGCCTTGCAATCGAGAGTGTCTCAAACCACGTCCAGCAAAATGCTCCCACAAATGTTCTATCCGAGCCTGCCATCCAGGAAACTGCCCTCCTTGTGAAACATTGGAACGGATTCCATGCCACTGTGGCATTACCGAGCTATACCTCCGATGTAGAGAGTATTCTACAGCTACAGAAGAAATGCTGTCGTGCAAACAACAATGCCCAAAGAACTTGGAATGCGGTCATCGTTGCAAAAACACCTGCCATGCTGGTGCCTGTAATAATCAAGTCTGTACCAAGAAAACTAAGATACACTGCCCATGTGGGAACCTGAAGAAAGATGCTCCATGCAATGCAGTCAGAGCGGGGGACGCTAAAACCGAATGCGATTCCTCATGTGAAGTTAAAAAAGCCGCCGCGAAACTGGAGAGTGAGAAAGAACAGCAGAGATTAAAGGCGTTAGAAGAGGAGAGGAATAAGAAAGAGCTGGCTGAATATGAGTGGAAACTCAGTGGGAAAAAGAAGAAGTATAAGGAAAAGAAGGTTGTGATCAATAAGGATGACCGAAGCTGGGTGCATCGGTACTGGCTGCCGATTCTGGCTGTTTTAGTAGCCCTGCTGGCAGTATTttactgtatttattttatgtag
Protein Sequence
MARRYRDVAAKLQQNVQKHLADMKDMSSSEDEEPYESSVIEGMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVACLICISSIKRTHAVWTCDHCYSYFHLSCIQKWGNDSISLRSIEPLAPISVYKPLKIEWCCPKCRNSYSKDEIPRKYRCFCSKTDNPPVHPWLIPHTCGEVCEKRLSAGDSCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKKVRCSAAKWSCGQQCRKTLLCQTHQCELICHEGECPPCTYSSIQPCQCRAEKTKRPCDDPFWHCKTPCNKPYSCGYHKCEKVCHPGNCGECPNSGMRSCPCGANQCYVQCPDTMETCLGTCGKKHEDCEHSCPEKCHKGVCPPCQVLIQKKCHCSTHTRSLPCSKEFKCDTKCRGTRPCGKHACARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPMESKITCRCKETYVTVPCGRERFTKPPKCHLPCKLKYKCGHIEENKHSCHFGDCPPCKAICYKTYPKCGHECKATCHEYKAVIFKQIEKPATPWEVQPPKTKIMTLECPPCITAVTVVCFGEHETDNQPCHAAARRPCGRECGKPLACGNHNCTLLCHLYSPDPNYPNIPHNCKPCNRECLKPRPAKCSHKCSIRACHPGNCPPCETLERIPCHCGITELYLRCREYSTATEEMLSCKQQCPKNLECGHRCKNTCHAGACNNQVCTKKTKIHCPCGNLKKDAPCNAVRAGDAKTECDSSCEVKKAAAKLESEKEQQRLKALEEERNKKELAEYEWKLSGKKKKYKEKKVVINKDDRSWVHRYWLPILAVLVALLAVFYCIYFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
-
80% Identity
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