Basic Information

Insect: Scotopteryx bipunctaria
Gene Symbol: -
Assembly: GCA_949320045.1
Location: OX439468.1:3455812-3458848[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.15 9 7.3 0.2 2 23 88 110 87 110 0.95

2 15 2.8e-05 0.0017 19.1 1.8 1 23 115 138 115 138 0.97

3 15 1.6 95 4.1 7.8 1 23 141 164 141 164 0.94

4 15 3.7e-05 0.0022 18.7 0.5 1 23 170 193 170 193 0.95

5 15 0.0031 0.18 12.7 2.1 2 23 201 223 200 223 0.96

6 15 0.085 5 8.1 0.6 1 23 228 250 228 250 0.98

7 15 8.2e-08 4.9e-06 27.1 0.6 1 23 256 278 256 278 0.98

8 15 0.092 5.5 8.0 0.3 1 23 359 381 359 381 0.95

9 15 0.24 14 6.7 0.1 3 23 453 474 451 474 0.93

10 15 0.00041 0.025 15.4 0.2 3 23 482 503 481 503 0.97

11 15 0.00096 0.057 14.2 0.7 3 23 510 531 509 531 0.95

12 15 0.004 0.24 12.3 2.7 1 23 537 560 537 560 0.98

13 15 0.00069 0.041 14.7 2.2 2 23 567 589 566 589 0.95

14 15 0.026 1.6 9.7 1.3 1 23 595 617 595 617 0.93

15 15 0.00057 0.034 14.9 1.2 1 23 623 646 623 646 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.15	9	7.3	0.2	2	23	88	110	87	110	0.95
2	15	2.8e-05	0.0017	19.1	1.8	1	23	115	138	115	138	0.97
3	15	1.6	95	4.1	7.8	1	23	141	164	141	164	0.94
4	15	3.7e-05	0.0022	18.7	0.5	1	23	170	193	170	193	0.95
5	15	0.0031	0.18	12.7	2.1	2	23	201	223	200	223	0.96
6	15	0.085	5	8.1	0.6	1	23	228	250	228	250	0.98
7	15	8.2e-08	4.9e-06	27.1	0.6	1	23	256	278	256	278	0.98
8	15	0.092	5.5	8.0	0.3	1	23	359	381	359	381	0.95
9	15	0.24	14	6.7	0.1	3	23	453	474	451	474	0.93
10	15	0.00041	0.025	15.4	0.2	3	23	482	503	481	503	0.97
11	15	0.00096	0.057	14.2	0.7	3	23	510	531	509	531	0.95
12	15	0.004	0.24	12.3	2.7	1	23	537	560	537	560	0.98
13	15	0.00069	0.041	14.7	2.2	2	23	567	589	566	589	0.95
14	15	0.026	1.6	9.7	1.3	1	23	595	617	595	617	0.93
15	15	0.00057	0.034	14.9	1.2	1	23	623	646	623	646	0.95

Sequence Information

Coding Sequence: ATGAGAGACTGCGACGTCTTAATAGAACACACGCAGAAACACAACTCTGTAGACCTCGATAGCTTCCTGAAGAAGCACATCATAACCAAAGATGTACCCGTCAAGATTGACGTTACAAACATAGCCTGTAACTATTGCCCTGAAGTGCAAATCAGCACCATGGACGAAATGGTTTATCATGTTGTTAACCACCACGGGGAGGAATACGATACGACGGTTGAACTCTGCTTATTTCCTTTCGTCCTGAACAAGGACTTCATGCAGTGCGTGCTGTGCGATTCTGACTACGATAACTTTACCTCTCTCATCGCGCACATGTACAAACAGCATGTGACTCATTCCTTCATGTGCCAGATCTGCGGTCTCGGCTTCAAAGACCAGATTCGCTTGAAGCGACACATTAACACTTGCCATGTAGGACATCGCTGCACTTTTTGCGATAAGTTCTTCAATGCTTTCCACAAACTCGATAAACACAAGGAGCGTTTTCACGGACAGTTaaaaacttacgaatgtaacTTATGCAGCGCGAGTTTTAAAAACAACTACCAGCTTAGAGTGCATTTGGGGAAGGAACATAACGTTGAGAAGTATAAGATAAAATGCGAGCATTGCGAGAAAATTTGCACGACTAAAGGAGCTATGTTGCTTCATATCCAAAGCATGCACGCTGAGTTTAAATACCAATGTGACTTGTGTGACTACACTACCGGGATCAAGTGGCTGGTGAAACTCCACAAACGCAAACATTTTGCTGTTAAAGATTACTCTTGCAGCATCTGCGAAAAGGCTTTTGGGAGGTCCAGCAACCTACGCACGCATATGAAAGTCCATGTAGGAGAACCTAGAGGTGGCCAGAAAGCAAAACTATTGATAAAACCAACCCCACCTGCAGTTCCGGTTCCGGTAGCCCCCGCCAGGCGATCGGCCAGAGACCTGGCCCCTTCCGCCAGCGTCCTCTCCACAAAACCCAAAGGGTTATCTTCAAAAGAAAAACGTAACATTATGATCAAAAACGTTCTTGAAGTCCTGCTAAAAACGACAGTAATGCCGTTCCGTTGGCTCAAAAGCTCCTATCGTTGCTTCTACTGCTATGATATATTCCAAGAAGCGTCAGAGCTCAAAGCTCACCAAGTCGCCCACACAGATGATACGCTCAAGGAAAAGGCTATGAAGAACTACTGGGAGCCGGTTGTCTACGTGGATATATCAAACTTGAAATGTAATCTGTGTTCCGATGATGTCTCGGACCTGTACGATATGGTCGACCATCTTATCGCTAAGCACAATgtcgtgtacaataaagatgTGGGAATATGCATGGTGGCTTTCAAACTGAACAATTTCGATGTGAGTTGTTTGGCTTGTGGCGCTAGTTTTTACACATTCGGGCCGCTCCTAAACCACACTAACAAAGATCATAAAGGCACGTCGGTCATTCTTTGCGAGATCTGCGGTCAGAACTACAAAGATCAGAATCTCCTGCGTTTGCATGTGAAATCGGCCCACGATAACAGTGGGATGCTGTGCCCCGAATGCGGCGACAAATTCGACACACGCTCCAAGCTGAAAACTCATCAAATAAACACCCACGGTTTAGAGCGTAAATTCAAATGTCTCGTCTGTGATCAGACCTTCGGCAGCCACTACAAGAGATCCCGGCACATGGCGACCGATCACAAAAACAGGCAGGAGATCAAATGTTTACACTGCCCTAAGACTTTTGTCTTTAGGAGTATGATGATGACTCACTTGCGTGATACACATTTGAAAGTCCGGAATCATATCTGCGGGGTGTGTGGTTGGAAAGCTTTTAACAGCAATCGGTTGAAGAATCACATGTACAAGCATAGTGGGGAGAAGAATTTCAAGTGTGATGGGTGCGACAAGGCGTTTACGACTCGGAAGATAATGAAGGCTCATTACTCAAGAATGCATAAGGCGCCACAGACTATGCCAGCGCCAGTAATGCCGCATTATACCACATATGGTGAACAGTAG
Protein Sequence: MRDCDVLIEHTQKHNSVDLDSFLKKHIITKDVPVKIDVTNIACNYCPEVQISTMDEMVYHVVNHHGEEYDTTVELCLFPFVLNKDFMQCVLCDSDYDNFTSLIAHMYKQHVTHSFMCQICGLGFKDQIRLKRHINTCHVGHRCTFCDKFFNAFHKLDKHKERFHGQLKTYECNLCSASFKNNYQLRVHLGKEHNVEKYKIKCEHCEKICTTKGAMLLHIQSMHAEFKYQCDLCDYTTGIKWLVKLHKRKHFAVKDYSCSICEKAFGRSSNLRTHMKVHVGEPRGGQKAKLLIKPTPPAVPVPVAPARRSARDLAPSASVLSTKPKGLSSKEKRNIMIKNVLEVLLKTTVMPFRWLKSSYRCFYCYDIFQEASELKAHQVAHTDDTLKEKAMKNYWEPVVYVDISNLKCNLCSDDVSDLYDMVDHLIAKHNVVYNKDVGICMVAFKLNNFDVSCLACGASFYTFGPLLNHTNKDHKGTSVILCEICGQNYKDQNLLRLHVKSAHDNSGMLCPECGDKFDTRSKLKTHQINTHGLERKFKCLVCDQTFGSHYKRSRHMATDHKNRQEIKCLHCPKTFVFRSMMMTHLRDTHLKVRNHICGVCGWKAFNSNRLKNHMYKHSGEKNFKCDGCDKAFTTRKIMKAHYSRMHKAPQTMPAPVMPHYTTYGEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01171697;
90% Identity: -
80% Identity: -