Basic Information

Insect: Scotopteryx bipunctaria
Gene Symbol: -
Assembly: GCA_949320045.1
Location: OX439469.1:1235296-1251579[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.9e-07 3.5e-05 24.4 1.2 1 23 5 27 5 27 0.98

2 15 0.006 0.36 11.7 1.1 1 23 33 56 33 56 0.95

3 15 0.0002 0.012 16.4 6.0 1 23 63 85 63 85 0.97

4 15 4.4e-06 0.00026 21.6 2.0 1 23 91 113 91 113 0.98

5 15 0.00016 0.0098 16.7 3.8 1 23 119 141 119 141 0.97

6 15 3.4e-05 0.002 18.8 0.3 1 23 148 171 148 171 0.95

7 15 0.00054 0.032 15.0 0.2 1 23 179 202 179 202 0.93

8 15 6.7e-05 0.004 17.9 2.2 2 23 209 230 208 230 0.97

9 15 0.0095 0.57 11.1 2.3 1 23 236 260 236 260 0.92

10 15 2.9e-05 0.0017 19.0 4.0 1 23 266 289 266 289 0.97

11 15 8e-05 0.0048 17.6 2.3 2 23 297 319 296 319 0.97

12 15 1.3 76 4.4 0.2 1 23 327 350 327 350 0.94

13 15 4.8 2.9e+02 2.6 0.4 2 19 357 376 356 377 0.89

14 15 0.67 40 5.3 2.7 1 20 798 817 798 820 0.90

15 15 0.19 11 7.0 2.8 1 23 974 996 974 996 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.9e-07	3.5e-05	24.4	1.2	1	23	5	27	5	27	0.98
2	15	0.006	0.36	11.7	1.1	1	23	33	56	33	56	0.95
3	15	0.0002	0.012	16.4	6.0	1	23	63	85	63	85	0.97
4	15	4.4e-06	0.00026	21.6	2.0	1	23	91	113	91	113	0.98
5	15	0.00016	0.0098	16.7	3.8	1	23	119	141	119	141	0.97
6	15	3.4e-05	0.002	18.8	0.3	1	23	148	171	148	171	0.95
7	15	0.00054	0.032	15.0	0.2	1	23	179	202	179	202	0.93
8	15	6.7e-05	0.004	17.9	2.2	2	23	209	230	208	230	0.97
9	15	0.0095	0.57	11.1	2.3	1	23	236	260	236	260	0.92
10	15	2.9e-05	0.0017	19.0	4.0	1	23	266	289	266	289	0.97
11	15	8e-05	0.0048	17.6	2.3	2	23	297	319	296	319	0.97
12	15	1.3	76	4.4	0.2	1	23	327	350	327	350	0.94
13	15	4.8	2.9e+02	2.6	0.4	2	19	357	376	356	377	0.89
14	15	0.67	40	5.3	2.7	1	20	798	817	798	820	0.90
15	15	0.19	11	7.0	2.8	1	23	974	996	974	996	0.98

Sequence Information

Coding Sequence: ATggctaaaaagttccaatgtGATATATGTGACAAGAAATTCTCCGACAAATACTATCTGATTACCCACCAGTCTGTCCACACTACTGAAACCCCGTTTGCTTGTACGCTATGTTCGTACCGAGGCAAGACTAAGAAATATCTGGCACGGCATATAAAGCAGATACATAGGGAGAAGTCAGGGGAACACAAATGTAGCTTCTGTGGGAAGGTGTTCCATCATCGGAGCAGTTTGAAGGTCCACGCTATGGTCCATACTGGTGAAAAACCCCATAGATGCAATGTCTGCGGAAAAACATTCCGAGTTACATATTCCTTGAATTCACACATGCTTATACATACAAatgaAAAACCTTTCGCCTGTTCTTTTTGCGATTACGCCTGTCGTGACAGTTCCACTCTCCGGAAACATCAGAACAAACATATGGGCTTGGAGAAGATCTACGAATGCAAGATATGCAATAAGGGctACAAATCCAGGGCAGCGCTCAAGATCCACATATCTGAGACACATCTAGACGTGGACGTCAGGAAGTACCCCTGCGGGCGATGCGACAGAGTCTTCAAGACGAATACCAACAGGAGAATACATATCGAGGCTGTTCACGAAAGGTCTCTAGTTTGCACTTGCCCCGTTTGTGGTCGTCGACTCATGAGTCGGAACAACTTGAGTTCACACATGCGCACACATTTACACCAGCGCCCCTTCAGCTGCACTCACCCCGGATGCCGACTCAGCTTCAAGAACAAGAATTCTCTAACAAAGCACAGTGTAATTCACAATCCAGATTTGCACTTCCCGTGCTCGCACTGCGGCCGGAAATTTGCGAGGAAAACGCACGTCCAGAGGCACGAGCGGGTCATGCATCTGGAGAGAGGGCGCAAAGTCGAATGCCACTACTGTGGATCCAGattcTACTCAAAGaactatttaattaaacataTACAGACGAAACATGTATATAAGCAGAAGTTTAAGTATATATGTGATTTATGCGGTCTTATAACACACAATAAGCCAAGTATAGTAATGCATTTGAAGTATGGACATTCTAATGACGATGATATGCAATGCAAAATATGTGATAGCAAAATAGTATACAAAAGACACATATATCTgaagttacattattggaacACCCATAACATCAAATACAAGATGACAAGGAAATCTACAAAGTCAAAGAAAATGAGAGATAGAGAACCTTCTGTAGAAGTAAAAGTGGAGCCGATCGAAGCGGAATCCTACGAGGAGATTCAACTACTAGAAGTGACCAAAAAGGAAGATGAAGAAGACTACGAAGACGACTCGCTCGGCTATTCAAAGCGTGTTCTATCAGAAGATATTACGGAATCTGTGTTACAGAAGAGGGAATTTACTAAGGAAGTCGATTTTGATGAGTTTTTCATTCGACATGTCTTCGCTAAGAATGAGGATAAAGATGAACAAAAAATTTCACAAGATGGCGTGAACGAAGAACAAAATGAATTCGTTAAAAAGAGAATCAAACAAATCATAACTCGAACTACGAAGATAGAGAAAGAGAAGGCGCTACGAGAGAAACAGAAGGTGGAAGAGAGAGAGAAGAGGGAGAGGGAGATAGAAGAGGCGAAGATACAAGCTCAGAAGGAGAGAGAAGAATTGGTGGAGTTGAGAAGAGTCAGGGTTATGTATAACGAGAGGATGAAGGCTGCAGTGGCGATGGAGAAACAGAAAAAAGaactaataaaaatcaaatacttCAAGAAGAATACTGAAAATGCGAATAAAACTACTGAAGAAACAAAAAGTTCAGAAAACATAAACAATGCTGAAAATGTgggtttaaatattataagcaCTGAAGATAATGATGTTATTGTCAATAATGACTCTGCTAATGTTACTGCAAATGATTCTACTAAAGATGTAGAAAAAATCAATGATATAAATGATACATCAAATAACGGAGAAGAAACATCACGAGACATTGACAAATGTACGAATTCAAAAGAAATTGAAGATTTACGTGAAATTAGCAAGAATGTAGAtgaaaataatactaataaagATGATTCTCTTGAAAATATTGATGAAAGAAAAAATCAGGAATATAGTGAAGAAAACAATGAAATTGAATCGACATCCTATAATTTCAATGATGATTCACAAACACTGGAGAAAAATGATATTAGTGATTCATTAAATGAAACTAATAACACTAATGATTCATTAAACGAAACGAATGAAAAAGCAATGTCTAATGATAACAATGATATATTTGACCAACCTCTTTTAAAAAGGCGACTAAGAAGtaaaaaacctaaaacaaGTCAGAAaaatgaagatgatgaagatgaccAAGGAAAGGTCATTGACCAAGGAAAGGCAAAGAAAATGGAGTTCAAAACATTCCAATGTTATATTTGCTTCAAGCTCTACGAAACAAAACAGGATCTAATCGACCATTGCCAAGAACATTTTGACATATGCCACGAAAAAACACTTGCCAAATGTCCAATATGCAACTATGTCAGCCATTTGGGCTTAGCAAAGCATATGAAACTAAAACATGACGTAACTATAAAAATTCCTTTCAACAAGATCCAAGAGCAGAAAACAGAATCCGGTTCAAAATACTGCTACGACATAGAAGGGACCATTGTAGAAGTAGTACCTAGCATCAAAATACTGAACAAAACTGCTAGTGACAATATAGATAAGAAAAGAAgagacaaaaacaataaaaccatAGCAAAATCTAAGCTAGTTAAGAAAGGAGATAATTGGATAGTCGAAAAAGAATCCGTAGATATCAAATTCGACGAAATACCAGAATTGAACGATAGAGAGCTGAATAAACTCAAAGTTAGTGACAATGACGTGGATAGATTGGGGCAGTTGGGTTATATAGCTAAGAAAAAAGGCCTAGATATGATGTTTCCTTGCTTTGACTGCgagaaaatatgtttaaacTTCAGTGCTCTTAAATTACACAAAAGGAGGCATGAGGAAAACCCTAAGCCATTTAAACCTAGGGTTAAAAGAACTGAAAAGTTAAAAGAAAtggataaaaataagttaaaagaAGGCAAAAAAGTTAAACTGAACAAAGATAACAGGACAGCATTtcctaaaccgattttgaataaacacaaatgtgataaaaagttaaaagagTTCTTTGAAAGTAATATCCGCGGGGGAGATGTTGAGTTTTGGCAGTTTTTGAAGatattcaacaaaatgaacAAGGAAAAGATAAATGATTTCAAAGATTTGGAGAAAAGGACAGATTTTGGCAATCATTTGGATTATTATAAGGATAAGAGCGATGATGATAACGAAACTGATGATATCGAAGTCGAAAATAACgataaagaagaaaataatgatgatgaagaagaaAACGAACATATGGATGAAACTGATATGGAAACTAATGAAGATGGAACTTCTAGCGATTAa
Protein Sequence: MAKKFQCDICDKKFSDKYYLITHQSVHTTETPFACTLCSYRGKTKKYLARHIKQIHREKSGEHKCSFCGKVFHHRSSLKVHAMVHTGEKPHRCNVCGKTFRVTYSLNSHMLIHTNEKPFACSFCDYACRDSSTLRKHQNKHMGLEKIYECKICNKGYKSRAALKIHISETHLDVDVRKYPCGRCDRVFKTNTNRRIHIEAVHERSLVCTCPVCGRRLMSRNNLSSHMRTHLHQRPFSCTHPGCRLSFKNKNSLTKHSVIHNPDLHFPCSHCGRKFARKTHVQRHERVMHLERGRKVECHYCGSRFYSKNYLIKHIQTKHVYKQKFKYICDLCGLITHNKPSIVMHLKYGHSNDDDMQCKICDSKIVYKRHIYLKLHYWNTHNIKYKMTRKSTKSKKMRDREPSVEVKVEPIEAESYEEIQLLEVTKKEDEEDYEDDSLGYSKRVLSEDITESVLQKREFTKEVDFDEFFIRHVFAKNEDKDEQKISQDGVNEEQNEFVKKRIKQIITRTTKIEKEKALREKQKVEEREKREREIEEAKIQAQKEREELVELRRVRVMYNERMKAAVAMEKQKKELIKIKYFKKNTENANKTTEETKSSENINNAENVGLNIISTEDNDVIVNNDSANVTANDSTKDVEKINDINDTSNNGEETSRDIDKCTNSKEIEDLREISKNVDENNTNKDDSLENIDERKNQEYSEENNEIESTSYNFNDDSQTLEKNDISDSLNETNNTNDSLNETNEKAMSNDNNDIFDQPLLKRRLRSKKPKTSQKNEDDEDDQGKVIDQGKAKKMEFKTFQCYICFKLYETKQDLIDHCQEHFDICHEKTLAKCPICNYVSHLGLAKHMKLKHDVTIKIPFNKIQEQKTESGSKYCYDIEGTIVEVVPSIKILNKTASDNIDKKRRDKNNKTIAKSKLVKKGDNWIVEKESVDIKFDEIPELNDRELNKLKVSDNDVDRLGQLGYIAKKKGLDMMFPCFDCEKICLNFSALKLHKRRHEENPKPFKPRVKRTEKLKEMDKNKLKEGKKVKLNKDNRTAFPKPILNKHKCDKKLKEFFESNIRGGDVEFWQFLKIFNKMNKEKINDFKDLEKRTDFGNHLDYYKDKSDDDNETDDIEVENNDKEENNDDEEENEHMDETDMETNEDGTSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -