Basic Information

Insect: Scotopteryx bipunctaria
Gene Symbol: -
Assembly: GCA_949320045.1
Location: OX439445.1:7361193-7366636[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 9.8e-07 5.8e-05 23.7 1.4 1 23 330 352 330 352 0.99

2 8 4.2e-06 0.00025 21.7 1.8 1 23 358 380 358 380 0.98

3 8 6.6e-06 0.00039 21.1 0.6 2 23 389 410 389 410 0.98

4 8 2.1e-05 0.0012 19.5 0.3 1 23 416 438 416 438 0.99

5 8 7.7e-08 4.6e-06 27.1 2.1 1 23 444 466 444 466 0.98

6 8 1.8e-06 0.00011 22.8 2.2 1 23 472 494 472 494 0.97

7 8 1.1e-05 0.00067 20.3 6.3 1 23 500 522 500 522 0.97

8 8 1e-05 0.00061 20.5 0.7 1 21 528 548 528 549 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	9.8e-07	5.8e-05	23.7	1.4	1	23	330	352	330	352	0.99
2	8	4.2e-06	0.00025	21.7	1.8	1	23	358	380	358	380	0.98
3	8	6.6e-06	0.00039	21.1	0.6	2	23	389	410	389	410	0.98
4	8	2.1e-05	0.0012	19.5	0.3	1	23	416	438	416	438	0.99
5	8	7.7e-08	4.6e-06	27.1	2.1	1	23	444	466	444	466	0.98
6	8	1.8e-06	0.00011	22.8	2.2	1	23	472	494	472	494	0.97
7	8	1.1e-05	0.00067	20.3	6.3	1	23	500	522	500	522	0.97
8	8	1e-05	0.00061	20.5	0.7	1	21	528	548	528	549	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTTTCCTGTGGCGAGTGGTGCGATGTTCAGCTTTTGTGCGGTGGACGCATTTTCAGCGCGCATCGGGCAGTCCTCGCGAGTGTCAGCGCTTTCCTTGGAAGCCTCTTGCTGTCCAATTCTGATGAAACAACTACGTTCATCGTGCTACCAGATTTTGATTTAGAGGCGATGGCCTCGgttctgtattatatttaccATGGTGAAGTAGTCTTGCAACAGGGCAAGTTGGGACTATTCTTGGACATTACCCAAGCTATGCAAATACACGTTGATCACCAATATTTGTCCAAAATGCAGGAGGATGTTGAAGACAAATACTTTGAAGCggaaaaacaaagtaaaactGTTTCATTACTACCTCGTGAGATATTCACTTTGGGATTAAAAAATGACGAGGGTCAACATatctttaatattaaaaaatgtaaagagACGAAGGGAACGcttttgaaatattcacagagcGACTTAGATTTTGACGATAACAGCGTACGATGCCAGAATGAGAGTGAGCTCGGCGAGTCTCGTTTAGGAAATCTGAAATCGCCGTACGAGGACCGACAAAGGAACTCTTTACTACGTGATTTATTTATCGAGACATATCCTCCAAACGGTAATGTTAACGGTCTGACAGAAAGCGTGCTGGCAATATCAAACGAATGCTATCAGTCTCCGGCATCTGTGCTCTTAGCGAATGCAAATTGTAGCCATCTCAGCATTGAAGACGTGCTCAAGAGACCGGCTAAAAAATCTACTAGCCACTCTTTGCATTCGTCCGTCGTCGCTGACCAGCCCGAGGGCGGGCAGCACGCCTACAACTGTGACGAGGAATGCGTTACCACTGATTCTCTACGCTATACGTTTCCTACAAATACAAATGCAGCGTTGATTTACGAAGAGAACACAGTTGAAAGAGTAATTATCAAAGAACCAGAATTGGTTGATAGTCATTTAATTGTTGAAAACAGAGAGAGTTTCAAATGCTCTCATTGTGATCAGGTGTTCACGAGTGGCGACTCACTTGCTGTTCACATGAGAAGGCACTCGACGAACGCTCGGTATACTTGCGGAGAGTGCGAGAAAACGTTCTCGCAACTACGGAACTTCAAGTACCACATGTCGATACACCGCGGCACCCGTGAGTTCGCAGCAACCTGCACTGTTTGCGGGAAGTATTTCAATGATAGGGGATACTTGAGCAGCCACATGAAAATTCATAGGAATCGTAAAGAATACAAATGCGCATTGTGCCCTAAGTCGTTCAACCAACGAGTCGCTTACAACATGCACGTTCGGATTCACACTGgtgTGAAACCGCATGTTTGCGAGGAGTGTGGCAAAGCGTTCTCCCGCAAGATGTTACTGAAGCAGCATCAGCGCACGCACTCTGGTGAACGGCCCTACGCGTGCACGCACTGCGATAAGCGCTTCGCGGACCGATCCAACATGACGCTCCATCTTAGGTTGCACACTGGAGTAAAGCCGTTCTCTTGCCCTATGTGCCCGAAGTCTTTCACCAAGAAACATCACCTCAAGTCCCATCTAAACTTTCATACTGGTTCCAAGCCGTACACATGTCCTCGCTGCGGCCTCGCCTTCACGCAGTCTTCCAACATGAGGACCCATTACAAGAAATGCACCGCGCCCGAGCCTAGTACAAGTAATCAAAGTAGCTTAGTACTGCCATGTTGA
Protein Sequence: MCEWLSCGEWCDVQLLCGGRIFSAHRAVLASVSAFLGSLLLSNSDETTTFIVLPDFDLEAMASVLYYIYHGEVVLQQGKLGLFLDITQAMQIHVDHQYLSKMQEDVEDKYFEAEKQSKTVSLLPREIFTLGLKNDEGQHIFNIKKCKETKGTLLKYSQSDLDFDDNSVRCQNESELGESRLGNLKSPYEDRQRNSLLRDLFIETYPPNGNVNGLTESVLAISNECYQSPASVLLANANCSHLSIEDVLKRPAKKSTSHSLHSSVVADQPEGGQHAYNCDEECVTTDSLRYTFPTNTNAALIYEENTVERVIIKEPELVDSHLIVENRESFKCSHCDQVFTSGDSLAVHMRRHSTNARYTCGECEKTFSQLRNFKYHMSIHRGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCALCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACTHCDKRFADRSNMTLHLRLHTGVKPFSCPMCPKSFTKKHHLKSHLNFHTGSKPYTCPRCGLAFTQSSNMRTHYKKCTAPEPSTSNQSSLVLPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336083;
90% Identity: iTF_01336083;
80% Identity: iTF_01336083;