Sbip015753.1
Basic Information
- Insect
- Scotopteryx bipunctaria
- Gene Symbol
- ALG11
- Assembly
- GCA_949320045.1
- Location
- OX439460.1:602665-625353[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6 5.8e+03 -2.5 0.0 1 11 55 65 55 65 0.86 2 2 5.4e-07 0.00037 20.5 0.0 2 35 268 302 267 309 0.90
Sequence Information
- Coding Sequence
- ATGGAAGGGAGAAACAGACGCTCTAGAGCAGAAAATATAGTTGCGTTGGCGTTGCAAAGTAGTGCATTGGGTGATTCAGAAAGCGATGAGGATTTTTCCAGCGATCATTCGTCCTACCACCCACCAGACCAGCTGAATGAATCTCTCAGCGATATAGGAAATGATGAAGaAATTCTACAAGAAGCTGTTCAGTCTTCCGCTGGCGTGTTAGGTAATTTAGGAGAAGTGGACAATACAGAGGCTAATGAAAGTGTTAGAGGAAGAAAACGGCACAGAAATGTAGAcgaatggaagaaaaatataagaaagcGCAAGAGAAATGAAGGTCAAGAATACATCAACGTAAAAGTCAACAAATCGACTCATCTCGAAAATATTGTGATGCATTACCTGGTCAGCGGCCACACATACTTACCCAACGATACCGATTTTTCCTTCATTAGTCGAGAGCAAAAGAAGAGGACAGACATTTTCACGCCTCAGGCATGGATGGATCTCGTGCGTTGCTGTCGAAAGCATAAGCCGTTCATAGTTCGAGACATGGCTGACAAGTTTCTCGACTTTGAAACCCTAACAACTCAATATAAAGACTACCATACTGTTTTTGGAGAAGctGTTCGAGATGAAAATATTACCGCTTATTTGGCTGAATCTGATGGCGAAGATTTCATACCCAGTGACGATGACATGGGTGATACTGCCTACGTGCCTGATCATTCCTCGACTTCTTCAGACGAAGAATCGGACGAGGAGATAACTGAAGAATCTGTAATACAGCAGGCTAGTGGAGAAATAAGAAGAGAAGAAGATTTAAGGAAAGCATTAAGTGACATTCGTGAGAAGAAAAAAACGATAAGACAAATATGCAAAGAATATGCTATTCCCAAGACCACATTACTGGACAAAATCAGTGGACGCAGACCAGATGGAGTTAAGAAACCGGGACCAGAACCAGCGCTAGGAGTGGATGAGATTTCTATCGAAACTGAATCTGAGAGGTCTCTTATGGAACTATCAATAGAACCAAATAGTACTATTTTAGAATTGGATGCAACTAAAGAAATCACCATTTCTTCATTACACGTAGAAGACGAAAACATAAATGATGAAGCTAACTCCAATTCGACTGTGCAGGTTCAAACAGTAACAGCTGAAATACATTCTGCACCAAAACCATCCACCAATGCCGGGCCTTGCACATCAAAAATCACCAGCAATAGAAATCTAGCTTCTTCTAAAATTGACTATGATGAAATCACACTATATCCGGATAATTCTAAAACTCTTGATACCAACAAAAACAATTCGTTCCCTGATTTGTCTCTTTCCACGTTACACCTTTCTGGCCTTGATGTTGACTCTATCGTGTCCTTAGACGACGTTCTAATTCTACCATTAGAAGATGTTATATTATCAACTCCCACTCCCACTACGTCAAGTGTTGAAAAAGAAACTCCTACTAAGGAACAAACGCCAGAACCGCCTCTGACCTCTTTGATTCATACACCAAAAAAAACCTGTGATCCATTTAAAAACCACCTAATGCTGCCTGAAATTTCTAAAGAAGCAAGAAAACCTAATAAGCAAAGGATTCCAGCAGCCATATCTTCTGCTGCATGGAGAAAGTATTACGAAGATAAAGAGCAGATCAAGAACGAAAAACAGGAAGCAATACGAAAAAGAAAGTTAGAACGAATAGAGAAAACAGAACGGGAGAGAGCTCGAAAGATTCAAAAAACTGCTCCGAAACGAAAAAAGAAGATAAAAGTCACACAGGAAACGATAGAGTCGATAGATGTGGAATCTGAGAAAGAAAATGTACCAGCCGTGGAGCTAATGAAATGTGctgaatgtgacgatgtattaATTTCTGATGTAGAAGATGACGATGAGAAAAACATTGGCTGTGACAAGTGTATTAGATGGTATCATCTGAAATGCACGCGATTTCTAGGATTAAGTTATTCAGAAGCCAAAGATAAGTCTTTTGAATGTGACTTGATCCTGGTGGTCTTtccttttgcatttataagtaTGCTGGTCTTGTTTGCCTGCATAACAATCCCGTTTGCCCTCATCTTTGCATCCTGGTACATGAGGATCAAAGAGCGGAAGCTGCAAAGGAGAAGGCGGGATGGTGCAAATGTGGCATTCTTCCATCCTGACTGTAATGCTGGGGGTGGTGGGGAGAGGGTGTTGTGGGTGGCCATTAGGGCTCTGCTGACAAGATACCCAGACACAACTATATACATATACACGGTGGAAACAGCAGAACTTAAGACCATCCTCGACAAAGCTCAGAACACATTCAATGTGAAAGTTGAGCCGGAGAAGATTAAGCTAATCAGGTTGTCATCAAGAAAACCCATTGAAGCTAGTACATACCCATACTTTACACTACTTGGCCAAAGTCTAGGCTCTATAGTGCTAGGGTTGGAGGCGTTTATGAAGCTAAATCCAGATGTGTACATAGACACCGCGGGTTATGCGTTCACGTACCCGATCTTCCGCTACGTGGCGTCGTGTCGCGTGGCGAGCTACACGCACTACCCGACCGTCACGCGCGCCATGATGCGCCGCGTCAAGCACCGCGTCGTCGCCTACAACAACGCCAGCGCCATCGCACGGAACCCCCTCTTCACGTGGCTCAAGCTGCTCTACTACAAGATATTCGGATGGTTGTACGGCGTGGTGGGGCGTTGCGCGCATGTTGTGATGGTGAACGGCTCGTGGACAGAGGAGCACATCAACGAGCTGTgggacgtgcctctgactacctACAGGGTCTACCCGCCCTGCGAGGTGAGCCAGCTGAAACAGCTGCCGTCCCTGGTGCAGGAAGGCGACCCCATCAGGATCCTGTCGGTGGCGCAGTTCCGGCCGGAGAAGGACCATCCTCTGATGCTGCAGGCCCTCTACGAGCTCAGGAACCTGCTCGTCAAGAACGAGGCGCTGTGGACCAGGATAAAGCTAGTTCTAGTGGGCTCGTGTCGGAACTCTGAAGATGAGGAGCGGGTTCAGAACCTGAAGGATCTCGCCAAGCACCTGTCTCTGGAGGACAGCGTGCAGTTCATAGTGAACGCGCCCTACGCCACGCTGCTCCGCCTCTACCAGACCAGCAGCATCGCACTGCACGCCATGTGGAACGAACACTTTGGCATCAGTGTGGTGGAGTGCATGGCGGCGGGGCTGGTGACAATAGCGCACCGGTCGGGCGGGCCGCGCGCCGACATCATCTCCGAGGGCGGCGCCAGTCGCACCGGCTACCTCGCCGCTGAACCGCACGAGTACGCGCGCGCGCTCTTGGAGGTCATCGCACTCTCGCAGATAGAGCGCCACGAGATCATCCGCGCAGCCAGggCGTCAGTGGATCGTTTCTCCGAAAAAGAATTCGAAAAGTCATTCCTAAGAGCAGCGGAACCTGTGATGGCAATAGAATAA
- Protein Sequence
- MEGRNRRSRAENIVALALQSSALGDSESDEDFSSDHSSYHPPDQLNESLSDIGNDEEILQEAVQSSAGVLGNLGEVDNTEANESVRGRKRHRNVDEWKKNIRKRKRNEGQEYINVKVNKSTHLENIVMHYLVSGHTYLPNDTDFSFISREQKKRTDIFTPQAWMDLVRCCRKHKPFIVRDMADKFLDFETLTTQYKDYHTVFGEAVRDENITAYLAESDGEDFIPSDDDMGDTAYVPDHSSTSSDEESDEEITEESVIQQASGEIRREEDLRKALSDIREKKKTIRQICKEYAIPKTTLLDKISGRRPDGVKKPGPEPALGVDEISIETESERSLMELSIEPNSTILELDATKEITISSLHVEDENINDEANSNSTVQVQTVTAEIHSAPKPSTNAGPCTSKITSNRNLASSKIDYDEITLYPDNSKTLDTNKNNSFPDLSLSTLHLSGLDVDSIVSLDDVLILPLEDVILSTPTPTTSSVEKETPTKEQTPEPPLTSLIHTPKKTCDPFKNHLMLPEISKEARKPNKQRIPAAISSAAWRKYYEDKEQIKNEKQEAIRKRKLERIEKTERERARKIQKTAPKRKKKIKVTQETIESIDVESEKENVPAVELMKCAECDDVLISDVEDDDEKNIGCDKCIRWYHLKCTRFLGLSYSEAKDKSFECDLILVVFPFAFISMLVLFACITIPFALIFASWYMRIKERKLQRRRRDGANVAFFHPDCNAGGGGERVLWVAIRALLTRYPDTTIYIYTVETAELKTILDKAQNTFNVKVEPEKIKLIRLSSRKPIEASTYPYFTLLGQSLGSIVLGLEAFMKLNPDVYIDTAGYAFTYPIFRYVASCRVASYTHYPTVTRAMMRRVKHRVVAYNNASAIARNPLFTWLKLLYYKIFGWLYGVVGRCAHVVMVNGSWTEEHINELWDVPLTTYRVYPPCEVSQLKQLPSLVQEGDPIRILSVAQFRPEKDHPLMLQALYELRNLLVKNEALWTRIKLVLVGSCRNSEDEERVQNLKDLAKHLSLEDSVQFIVNAPYATLLRLYQTSSIALHAMWNEHFGISVVECMAAGLVTIAHRSGGPRADIISEGGASRTGYLAAEPHEYARALLEVIALSQIERHEIIRAARASVDRFSEKEFEKSFLRAAEPVMAIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -