Sbip019339.1
Basic Information
- Insect
- Scotopteryx bipunctaria
- Gene Symbol
- -
- Assembly
- GCA_949320045.1
- Location
- OX439467.1:1941661-1941981[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-12 4.3e-09 36.3 0.1 1 38 9 46 9 52 0.95 2 2 9 6.1e+03 -2.6 0.0 2 12 67 77 66 79 0.76
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGGGCATTATGGTCAGAAGATGATCTGATCGCAGCTGTTCGAGCAGTACAAAGAGGAACTATGAGTACATATACGGCTGCAGAAAGATATAAAGTTTCTAGAAGGACAATCAGAAATCATCTGCAGTTTGGAAGTTTAAAGAAAACTTCACAAAAGCAAGAGAGTTGGTACTGTCATGCCTGCGAAGAAGACAGGATGGATGATGCAATGAGGCAATGCTCGCGATGCTTCAAGTGGTATCATGAACAGTGTGTCGGTTTGTCGGTAGAAGATACTGATGACTTGCAGAGTCCTGATGGATGCGAATAG
- Protein Sequence
- MPPKRALWSEDDLIAAVRAVQRGTMSTYTAAERYKVSRRTIRNHLQFGSLKKTSQKQESWYCHACEEDRMDDAMRQCSRCFKWYHEQCVGLSVEDTDDLQSPDGCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -