Samb011676.3
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- GATA-B
- Assembly
- GCA_963921215.1
- Location
- OY992503.1:605025-610426[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-16 3.6e-12 48.0 7.8 1 34 19 51 19 53 0.97 2 2 2.2e-18 1.8e-14 55.3 6.2 1 35 85 118 85 119 0.97
Sequence Information
- Coding Sequence
- ATGGCGGTGTGTTGCGCAGTCGATATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACCGTGCACACGCCGCTGTGGCGCCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGccacgccgcgcccgcgcccgcccccgACGCGGGCACGAAGCGGCCGGGCACCACGTGCACCAACTGCCACACCATGACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCCTGCGGGCTCTACTACAAGCTGCACAGCGTCAACCGCCCGCTCGCCATGAAGAAGGACGCCATACAGacAAGAAAGCGGAAACCGAAGAACGGCATGAAGTCGGAAAGGAACATCAAGACGGCCGTCCAGCGCACGCTAGCCTCGGGCGTCAAGATGGAGAGCCTGATGGAGGGCGGCGTGTcgcgcggcgcggcgctggGCTACTACGCGCACGCGCAGCACATGAAGCTGGAGGAGCCGCCGCCCGCGCACGCCTACGACGCGCCCGAGTACCGGCGCGCGCCCGACGAGCGGCTGGAGCGCCCCACcgtggtgtccatgggcagctga
- Protein Sequence
- MAVCCAVDMAEFFTEGRECVNCGTVHTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAPAPAPDAGTKRPGTTCTNCHTMTTSLWRRNAHGETVCNACGLYYKLHSVNRPLAMKKDAIQTRKRKPKNGMKSERNIKTAVQRTLASGVKMESLMEGGVSRGAALGYYAHAQHMKLEEPPPAHAYDAPEYRRAPDERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076117;
- 90% Identity
- iTF_00683842;
- 80% Identity
- -