Samb019440.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963921215.1
- Location
- OY992505.1:9355661-9357925[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.2 1.9e+04 -2.4 2.6 63 89 43 68 8 104 0.46 2 3 9.1e-101 8.5e-96 322.4 7.8 2 218 224 432 223 432 0.94 3 3 0.52 4.9e+04 -3.7 0.2 61 79 652 670 629 713 0.44
Sequence Information
- Coding Sequence
- ATGAAGGATACAACCGCTCCGCTCAATATGGCCTCTAAAGAAGAGGAGCCAATTAAACACAATGACCCAATCGTAAAAACTCCAGAAGAAGCCGTAGAACAAGAACTGTCTTCTTTGAAAGATGATAAAAACAGTGACAGTGATGCTAACAGTGATTTAAGCTCCAATGAggatcaaaatattataaatagtaataatagcAATAACGGCTCTCAGTTCTATGAGAGCAGTGATAATAAAATAGATTTTGCTGTAAAACTAGATGATAGTGACACTTTAAGCGATATAGAAGATATAAAAACGGACACAGCTTCCGCTGATAGTGAAGATTCTGCACTCGGTAGTTTACCTCCTGACGGTGCGCCCAATGAGAGAGACGAAGAAGTTCAAGATCGGTCAGATGGTAGTGACTCAGGTCTTGGGTCTGAAACTCACGAAGATTCTAAGCTGCCTTCATTTAATCTGTCGTTGCCATGTACTAGTAGTGTTGATaatgaaaaattaaatgaaactcGACCAACTAATGACGATATAAATATAGcgataaataatgataaatcaGATAGTAACAGCAGTAATCCTTTATTGATACATCAACAAAAACCTCTTAGAAGTAGTCTTAAAAGAATACTCGAAGATGAAGATAACAATGAATCACAACCTAAAAGAAGAAAAGAGGGCATTAAATTTGATAACGTCACTGTTCATTACTTTCCTAGAGCTCAAGGTTTTACTTGTGTTCCCTCACAAGGAGGTTCTACGCTAGGAATGGAATGGGAGCACACTCATACTCAAAAATTTACCCTCCCTGAACATGCACTAGAACAGAGACGACTGCACAGACAAATCTTACAGCAATTAAAAATTGAACGTCAGTCCTTGCAAGGTGCATCGCTTTCCTCGAGTGAAGATAGTGACACCGAGGAGGAAACTAGTGATATTTCAGAGTCAGAGCTAGATTTAGACAGTTATTATTTTCTTCAGCCTATACCGACTAGACAAAGGAGAGCTCTTTTGCGCGCGGCAGGTGTACGAAAGATAGAAGGTTATGAGAAAGATGAATGTAGAGACATCAGAACGTCACGAGAATTCTGCGGATGTTCTTGCAAAGGTGCCTGTAATCCTGAAAGTTGTTCATGCAGCTTGGCTGGAATAAAATGTCAAGTGGACAGGCTGAACTTTCCATGTGGATGCATTAGAGACGGTTGTTGCAACACAACTGGGCGGATAGAATTTAATCCTGTTCGAGTTCGGACTCACTTTATCCACACTCTTATGAGAATAGGTCTCGAGAAGAAAAACGAGGAAAATCAAGAGGCTGCTAGAAGACATTGGGCGGAATCACATAATGCCAGCTCATCAATATGCACACCAAACACATCGTATGATAGAGATCGATGCCAACGTCATGATGACGGTTTGCTTCGCGACGTCAATTTAAGTCCCAGGCTAGAAGTTGAGTCGTGTGTAAACGCTGGAAACTTTAGTAACGTTCATTGTGATGTAAATACTGGTGTTGCTCACAGTAGCATGCAAGGTGACATGAGCTATGGATACCGAAATGACTCTATCAACAATAGGAATATGAATGAAAGTAACATGCACTATCAAAGTGTCAATAACCACCACAACCATGCGGATCCTTATACTTCTAATGTTATTCAAGGCAAAGTACCTCTTTACCCTGTAGCCAACACTATGGCCTATGAATCTATGCCGAATAACATGCAAAGATTTTCTTGTGATCACACCTACACATACGAGCAACACTGCGAAAGTCATCAATTCAAAGGGCTACAGAGCTTTTCTGCAACAAGTTTTGAAGAATTTGCACATAATTCCCAAATTAACATGTTTAGTCATTACGGACACATGTACGTGCCTGAATATTTGCATAAACCGAACACTATTATGAATGAGCACAGCTCTCTTCAATATCACAATACGCCTCAAAACCAATACGAAGCGTATAAAACTAATCCTGCAGAGTGTGTTAGCGTCGAAAACAAAAGCGATTCGCAATACACGACTCTGATGACGTTGCCATATCAGAATAGCAATAAGTTGCAGTCAGTAGAGAACGATGAAAATTGGTTTAGTCACAATACTCTGTTGAGCTTGGACCACGCTGACCATGCCACACAGGATGCCTCCGAGGCGCCGGCCCAACCAGTGGAAACGCCACAAGCTTGCGACCACGCTGAAACCACGGAGAACTTCGGagagttaattaaaaaaactatggtAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MKDTTAPLNMASKEEEPIKHNDPIVKTPEEAVEQELSSLKDDKNSDSDANSDLSSNEDQNIINSNNSNNGSQFYESSDNKIDFAVKLDDSDTLSDIEDIKTDTASADSEDSALGSLPPDGAPNERDEEVQDRSDGSDSGLGSETHEDSKLPSFNLSLPCTSSVDNEKLNETRPTNDDINIAINNDKSDSNSSNPLLIHQQKPLRSSLKRILEDEDNNESQPKRRKEGIKFDNVTVHYFPRAQGFTCVPSQGGSTLGMEWEHTHTQKFTLPEHALEQRRLHRQILQQLKIERQSLQGASLSSSEDSDTEEETSDISESELDLDSYYFLQPIPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCSCKGACNPESCSCSLAGIKCQVDRLNFPCGCIRDGCCNTTGRIEFNPVRVRTHFIHTLMRIGLEKKNEENQEAARRHWAESHNASSSICTPNTSYDRDRCQRHDDGLLRDVNLSPRLEVESCVNAGNFSNVHCDVNTGVAHSSMQGDMSYGYRNDSINNRNMNESNMHYQSVNNHHNHADPYTSNVIQGKVPLYPVANTMAYESMPNNMQRFSCDHTYTYEQHCESHQFKGLQSFSATSFEEFAHNSQINMFSHYGHMYVPEYLHKPNTIMNEHSSLQYHNTPQNQYEAYKTNPAECVSVENKSDSQYTTLMTLPYQNSNKLQSVENDENWFSHNTLLSLDHADHATQDASEAPAQPVETPQACDHAETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682440;
- 90% Identity
- -
- 80% Identity
- -