Samb054653.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scoparia ambigualis
Gene Symbol
Arid2
Assembly
GCA_963921215.1
Location
OY992516.1:18136048-18181461[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-20 6.4e-16 60.8 0.0 2 89 17 101 16 101 0.93

Sequence Information

Coding Sequence
atgtcaaaatctCAATTAAACACTAAATCCAGTGGCTATATAAAGGACAAAGAGGGTTTTCTTAAGGATCTGAAGCAATTCAATGAGTCTAAaaaCATAACCTGCAAGCCGCCAATAGTGAATGGTATAGAAATAGATCTTTATCATTTGTACTCATTGGTGCAACAAAGAGGTGGTCTTGGCAAGgttAACCAATATGATACGTGGGAAACATTCTTGCGGCCGTTGAGACTGCCTCATCCTTGTGTCAATGGCTCTACATTACTTCGAAGACTATATGGCACTCATTTAGAAAAATATGAACGAGCTAAAGGCCCGCCCGGCAGAGACGATGACAACGATCTGGACGAAGACCCGCGCCGCGGCCGAGCCGGGGGCATGCCGCGAATATCATTCGGTGGTGGTATTTATATCTCAGCATCAGGGGAAGCCCTCCGCACCGGCAGCAGAGTGGCGGGACCTTCAGAGAGGCTGGCCCTCTCCCTCCTCTCCCCTATGCCCAATGAGCAGGACTTTGCGGTGAATGTGTGTACTGTGTTAGCCGCAGACCACTCAAACAGACTGCCTTTGGCCTCTACACCACACATACTGGACTTTTTGTTGGCTCATGCCGGAGTTTATAACCATTCAAGTCTACGCGACACTATCGGGCGGTCGTACCACGAAACGCGCGGTCGCTACCCCGACGAGTTTTGGCAGTtgcgcgcgggcggcgggggtGCCAGAGAGCTAGCCGACGAGACCAAGTTCATGCAGCCAGGGTTAGAACAGCCCGAGCTCATGGTACAAGCCTTGGCGGCGCATAACACTCTGACTGACTGCCTGATGCAGGAAGACGCGGAGGAAGATTTAATGGACAAACTGTTTCATGATGACGTGTTAGAAGACTGGGTCACCGAGCCCTCTGAAGAGAGTCAGCTGTTCGCGCCAGTGCTGCAAGGCGGCGCGACGTGCGTTTTCACGCAGCGAGTGCTGCAAATAGCCTCTATAGTCCGCTCGCTGTCTTTCCACGAAGAGAACGTGCAGTATTTGGCGAAGAGCACTACGCTGATAAGatTCTTGTTGTTGTGTGCAAATTGCTGGGTGGGTTCGTTGCGGCAGTCGGGCCTTGATACACTCGGAAACGTTTCTACGGAACTTGTAATAAAGGACCCAGCGACTTGCCTCATCTCACGGCACGTGCTATCCACGATACAATCGGCCCTGGTCTCCCCGGACCGCGCGAGGGTGCTCGCTGCTTTGGAGCTATTGAACAAACTCGCGCAAAACGAGGTCAACGAAGAAGCGCTGCTGAAAGCTTTGGAAGCTAAGGTGTACAGCGACGTGTGCTCGCTGCTCACGCTCCGTGACATTATGGTGCTCGTGTGCACTCTGGAGTGCGTGTACGCGCTGACGTCACTGGGCGATAGGGCTAGCGAGGCCGTTGCCCGGGTGCCTGGTCTCGTGCACACGCTGGTCTCGCTCGTCACGGTGGAGGCCCAAAGCTACGGCCCGCGCGCTTGCATTCTGATGCGCGTCGTGGAGACCGTGAGCGGGCCGAGCGCGTTGGCCGCCGTCGCGGAGAGGGACGCGGCCAATCAGAGCGCGCACGCGCATCAGCAGGTGCCGATACAGAAGCCCCCCGAGCAGGTTCCTTCCGCACAGGCGCAatccgcccccgcccccgcgcccgcgcccccgcccgcgcccgctCCCGCGCACGCGCCCGCCCCCGCGCACGCgcacgcgcccgccgccgcgcacGCGCCCACGCCCGCCTCCGCCCCCGGGGTGTCTACGCTGCAGCAGTCGCATTTGCAGCAGAGGACTGTGCAGGAGAACGAACACTTCGCCCAAGCGTGGCTCCGTTCCACGTACGAGCCTCTGCCGCCCACCGATAACACGGCGTACGACGCCGCCGAACTCTACCGTCAATACCTAGCGTGCTGCAGCAAACTGAACAGGAAGGGAGTAATCGCGCCCGCACACTTCCCACGGCTGGTGCGGACGGTGTTTGGTGGGACAGTGGGCCCAAACAACGTCACCACGTCGTCAGGGGAAACGCAGCAAGTGTACATCGGCATTCGATCCAGGAACCTACCCAATAGACCGAACCAGCCCGCAGGCCCGTCGTCGCCGATCCTGAAAGCGCAGTTGACGAACAAGCCGGGAGCTGACGTCAAACCAGTGGTCGCACAAGCTCAGCCTCAGCCGCAGCCGGTGACGTCCCACCCCCACCTTTCGCAGGCCTTAGAGACGGGCCAATCCAACACTACGCTTATAAAACACCTTCTAGCGCACAAAGTAAGCCCCGCCCCGCTGCATCAAGTCGCGCAAAGGCAGCAGAGCCAACAGCGAGTTGGCCCTACCACCAACACCGTCGTGGCACAACAAAACCAGGTGATGGATGTCGACCCCGAAGCCCTTATAAAGTGCACGACTATCACACCAGGTGGCATCGCTAGCAGCACACCAGCCGCAGAAAagGTCATCATAAATGCTGCTGAGGAGTCAATAGTTGTTAAAGACGAACCCGTCCAAATTCAAATAGACGAGCAGACGCAACTGACAATCAAAACTGCTCAGAATAAAATGCTCGCGGATTTGCTAGAGAAAAAGTCCAACCCTCCCGTCCAAGTTGTGCAAATGGGCCAACAAGTTAACGCCCCAACCATCCAAATAACCGAAACCGGCCAAATAGTCCAAGTGAAGGCGGAAACGGAGCCGGTCATCCATATCAGCCCCGAGACCAACCAATACTTCCAAATAAAGAACGAGCAAGGCCAACTCATCCAAATAAAGAACGACCAGGGCCAAATTATCCAACTGAAGGGTGAATTGCAGGGCCCGCAGTTGTTGCAGTACAAAAATGAGCATGGCCAGATAGTGCACGTGAAGAGTGACGGCCATATTAATGTACAGAGCGGCCAGTTGATACAGCAGGCGGTCATGCAGGCCATGAAGGTGGACAAAGACCATTTGGTCGACACGGTGGTCACCGATCACTCGTATACGGAGCCGCCGCAAAAGAAAACGAAATTCGACGATAAAAGAGAGGCCAGGTCACCACAAGAGAGTGTTTCCAAGACAGCAGCCAATCTTTACGCGGCTCTCGCGGCTTCTGCGTTAGAGGACGAAGACATGATACCACCCAAACCAGAGCCGATGGAAGCAATGCCTCAGTCTGTTCTGGTCCAACCGCCTCCGTTGCAGATACAACAGCCTACGCTGCAAGTCCAGCAGCCGACACTGCAAGTCCAACAACCCACTTTACAGGTGCAGCAGCCGTCGATGCAGGTTCAGCAGCCGATGCTGCAGGTGCAGCCGATGGACGTGCAGAACATACTCTCCTCGCAGTCGGGCCAGATCATACTGCaagAGAAAACGATGTCATCTCAACAGCAGTACGTGCAACAGCCGATGCAAATCATCGCAACGCCCAGCTCATCTCAAGGTGGTCTAAGTTACATAACACAAAATATACCGGGTAATATGATGCAGAAAACCATTATTATAGTCCAGGGGCCGACGGGCGGCGGACCCCTTACTTTGACGGTGAACAACCCCGGTGGATTGGACGAGGCGACGCTAAACAGCCTTATTGCGCAGGCAACAGAGGCCATAACGCAACAACAAATCATCCAGAACTCGGGCGTGATACAGTCCACGCAGCGGGTGATTGTGAGCCAACCAACGCTTGTGAGCACATCACAGCCGATCACTGTGGTCAAAACGGCCATTGCGCAGGTTCTATGCACATTTTTAGCACAGACGCTAGCATATCGAGATTCGCTGGCACGTGTAGCTTGCGTAAGGGTGTCTTTACATTACTGCAATAGCGGGTGA
Protein Sequence
MSKSQLNTKSSGYIKDKEGFLKDLKQFNESKNITCKPPIVNGIEIDLYHLYSLVQQRGGLGKVNQYDTWETFLRPLRLPHPCVNGSTLLRRLYGTHLEKYERAKGPPGRDDDNDLDEDPRRGRAGGMPRISFGGGIYISASGEALRTGSRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLASTPHILDFLLAHAGVYNHSSLRDTIGRSYHETRGRYPDEFWQLRAGGGGARELADETKFMQPGLEQPELMVQALAAHNTLTDCLMQEDAEEDLMDKLFHDDVLEDWVTEPSEESQLFAPVLQGGATCVFTQRVLQIASIVRSLSFHEENVQYLAKSTTLIRFLLLCANCWVGSLRQSGLDTLGNVSTELVIKDPATCLISRHVLSTIQSALVSPDRARVLAALELLNKLAQNEVNEEALLKALEAKVYSDVCSLLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPSALAAVAERDAANQSAHAHQQVPIQKPPEQVPSAQAQSAPAPAPAPPPAPAPAHAPAPAHAHAPAAAHAPTPASAPGVSTLQQSHLQQRTVQENEHFAQAWLRSTYEPLPPTDNTAYDAAELYRQYLACCSKLNRKGVIAPAHFPRLVRTVFGGTVGPNNVTTSSGETQQVYIGIRSRNLPNRPNQPAGPSSPILKAQLTNKPGADVKPVVAQAQPQPQPVTSHPHLSQALETGQSNTTLIKHLLAHKVSPAPLHQVAQRQQSQQRVGPTTNTVVAQQNQVMDVDPEALIKCTTITPGGIASSTPAAEKVIINAAEESIVVKDEPVQIQIDEQTQLTIKTAQNKMLADLLEKKSNPPVQVVQMGQQVNAPTIQITETGQIVQVKAETEPVIHISPETNQYFQIKNEQGQLIQIKNDQGQIIQLKGELQGPQLLQYKNEHGQIVHVKSDGHINVQSGQLIQQAVMQAMKVDKDHLVDTVVTDHSYTEPPQKKTKFDDKREARSPQESVSKTAANLYAALAASALEDEDMIPPKPEPMEAMPQSVLVQPPPLQIQQPTLQVQQPTLQVQQPTLQVQQPSMQVQQPMLQVQPMDVQNILSSQSGQIILQEKTMSSQQQYVQQPMQIIATPSSSQGGLSYITQNIPGNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLIAQATEAITQQQIIQNSGVIQSTQRVIVSQPTLVSTSQPITVVKTAIAQVLCTFLAQTLAYRDSLARVACVRVSLHYCNSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-