Samb010072.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- osa
- Assembly
- GCA_963921215.1
- Location
- OY992502.1:56681263-56708274[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-25 1.1e-21 79.3 0.0 2 89 209 293 208 293 0.94
Sequence Information
- Coding Sequence
- ATGGGCCCTCCAAcgccgggcgcgggcggcggcccCGGCGGCCCCGGCGGCCCCGGGGGCCCCGAAGGCACCATGCCCCCGCCCACCGCCCCCGGCGAGGCGCACGACAACGGGCCCGCCGCGCCCGCCACCGCGCTCGTCACCACCGGCCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCAGGTAGACACACGTACTCCGCAGGTAGACAGCGTAGCTACATAGACACACTATTGGAGCTGCAGGGGTACAATCGCGAAGTAGTCCACCCGCCCTCGTCACTACCAGCTTTAAAGGTTTGGCTGGATGAGGGCAACCAGCAGAGCACGCTCAGCAACGCCTCCGCAGCGTCCGGCGAGGAGTCGTGCGGCACGCCGAAGGGCTCCCGCAAGGAGTACGGCGCCGGCAGCGCGGCGCCGTCGCCGTCGCCCGGCGGCGGCTCGCACTCGTCGGTGCACGACGACTACGACGCGTCGCCGTCGTGGCCGCGCCCGCCCTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGCCGCGGCTGGGTGGAGCGGCTGCTCGCCTTCATGGACGAGCGGCGCACGCCCATCGCCGCGTGCCCCACCATCTCCAAGCAGCCGTTAGACCTCTACCGGCTGTATCTGTTGGTGCGCGAGCGCGGCGGCTTTGTGGAGGTGACGAAAAACAAGACGTGGAAGGACATCGCGGGCCTCCTCGGCATCGGCGCCTCCTCCTCCGCCGCGTACACGCTCCGCAAGCACTACACCAAGAACTTGCTCGCGTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAGCCGATCATCAACCAGGTGGAGGCGTCCACCAAGAAGAAGAGCGGCAAGTCGAACAACAACAACACGGCGGGCTCGTCGAACTCCCAAGAGTCATTCCCcgccggcgcggcgggcggcggcgcgccgaTGGACGGCTACAGCCCGCAGTACGCCGGCTACCCGCCGCAGCCCAACCAGGCGCAAGGCGGCGGGCCCGGCGGGGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCCAGAAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATACGGATCTCCTTACCAGCCGAACAGGCCAGTTTATCCCCCTTACGGTCCCGACGGCGACAGGGGGTACCGAGGCGGCGGCGAGTACCAGTACGGCGGCTACGGCGGCGGGtaccgcgcggcggcggcgggcggcggcgcgggcgcggggggcacgccgccgcccgcgcagCCCTACCCCGACTACTACCGCGCGCCGCACCCGCATCCGCACCCGCCGCACCCGCCGCACTCGCCGCACCCGCCGCACCAGCCCCACCAGCCCCACCAGCCCCACCCGCCGCACCAGCCCCACCCGCCGCATCCGCCGCACCAGCCGCACCCGCCGCACCAGCCCCACCCGCCGCATCAGCCGCCGCATGACATATCGGGCGCGGCGCAGCAGCCGGTCGGTAACCTAATGAGCTCGCAGCTCGCGCGCCAGCTGGTGGCGCCGCTGCCGCCCACGCCCCGACCCTACTACGGCGGGGGTAAACCGCTGGGCGCCGGCGTGCCCGGCGCGGTGGTGCAGGGCGCGCCCCGGCGGCACCCGGACTTCGCGAAGGCCGAGGGCGGGTAtgcgggcgcgggggcgggcgcgggcgcggcggcggcgcccgcGCGATTCCCGCCCTCGTGGCCCGCCGGCTTCCCGCGCGCGCAGCCGCCCTCGCCGCAGCCGCCctggcgcccgccgccgcccgcgcagCCGCCCGCCGGCGCCGCCTGGCCGCACCAGCCCTACCAGCACCAGGGTACAGCACCAGGAATGACTGCCGGACAGATAAAAAGAGAATTGACGTTCCCCGCCGAATGCGTCGAAGCGACGGTTCCTACGGGAGAAAAACGGCGGAGGCTAACCAAAGCCGACGTCGCGCCAGTGGACGCGTGGCGAATAATGATGGCGCTAAAATCCGGCCTTCTGGCCGAGACGTGTTGGGCGCTCGACATATTAAATATACTGTTGTTCGACGATAACTGTATAGGTTACTTCGGGCTGCAGCATATGCCCGGGTTGCTCGACCTACTGCTGGAGCACTTCCACAAAAGCCTAGGCGACGTGTTCGACGCGCCCGCGCCCGAGGACACGCCTTGGTACGCGCCGCCGCgcacgccgccgcccgcgcgccCCGCCTCCCCGCGCCGTCTCGCGCCGCCCGACCCCGCGCTGCGCGTGCGCCTGCTACACGGCGACAACTACACGCTGGAGACGCGCCGCCGCCAGCCCGTCACCGTGCGCTCGGACGACGACCTGTTTGCGCCCGACGACGACGCGCCCGACGCGCACCACGACATCCTCGAGCCCTGGCAGTTCGGCGGCGACGGCGGCGCCGCGCACTTCGTGCCCTGCCTGCGCCTCGAGGCCGTGCACCTCCCCTTCGCGCGCGTGCTGCCCGGCAGCCGCGCGCCCTCGCCCGTGCcggccacgccgccgccgcccgcgcccgcgcccgccacgccccgcacgccgcgcgccgccacgCCCGCGCCGCCCGACGGCGACAACCTCGAGGCCGAGCCCATGGAGCTCGAGCCCGAGCGGAGGCCCGAACTCCTCATACGGGACCCCGCCGGCGTTATGAAACGGCGCCGCCTCGAAGACTACGAAGACGAGTGCTACACGCGGGACGAGCCGAGCCTCAACCTCGTGGACGAGACGCGCGACGCGCTCGCCAAGCGCTGCATCGCACTCTCGAACATTCTGCGCGGACTCACGTTCGTGCCCGGCAACGAGGTGGAGTTCTCGCGCTCGAGCAGCTTCCTGGCGGTGGCGGGCAAGCTGCTGCTGCTGCACCACGAGCACTCGCCCCGcgccgcgcgcgcgcgcgcctACGAGCGGGCGGCGCGCGACGACGCGGACGCGGCCGCCTGCTGCTCCAGCCTGCGCGGCGGCGCCGAGTGGTGGTGGGACGCGCTGGCGCAGCTGCGCGAGGACGCGCTCGTGGCATGCGCCAACATCGCGGGCGGCGTGGAACTCGCGTCGCAACCCGAGGCCGTGGCGCGGCCGCTGCTGGACGGGCTGCTGCACTGGAGCGTGTGCCCCGCGGCCGTGGCGGGCGACGCGGGTCCGGGCGCGGGCTCGGCGTCGCCGCTGTCGCCGCGGCGGCTGGCGCTGGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCCAACGTGGACCTGGTGCTGGCGACGCCGCCGCGCGGGCGCATCGCGGCGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCGGAGCGGCCCGTGGTGCGCGAGTTCGCGGTCAACCTGCTGCACTACctggcgggcgcgggcggcggcgcggcgcgggagGTGGCGGCGCACGCGCCGGCCGTGGCGCAGCTGGTGGCGTTCATCGAGCGCGCGGAGCAGGCGGCGCTGGGCGTGGTGAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCCGACGCGATGGGCACCTCGCTGGACATGGTGCGGCGCGCGGCCGCCACGCTGCTGCGGCTGGCCGAGCACCGCGAGAACCGCGCGCTGCTGCGGCGACACGAGCGGCGGCTGCTGGCGCTGGTCATGTCGCAGATCCTGGACCAGAAGGTCGCGCACGAGCTGGCCGACGTGCTGTACCACTGCAGCCAGCGGCGGCCGGACGCCGACGTGTAG
- Protein Sequence
- MGPPTPGAGGGPGGPGGPGGPEGTMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAGRHTYSAGRQRSYIDTLLELQGYNREVVHPPSSLPALKVWLDEGNQQSTLSNASAASGEESCGTPKGSRKEYGAGSAAPSPSPGGGSHSSVHDDYDASPSWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNNNNTAGSSNSQESFPAGAAGGGAPMDGYSPQYAGYPPQPNQAQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRGYRGGGEYQYGGYGGGYRAAAAGGGAGAGGTPPPAQPYPDYYRAPHPHPHPPHPPHSPHPPHQPHQPHQPHPPHQPHPPHPPHQPHPPHQPHPPHQPPHDISGAAQQPVGNLMSSQLARQLVAPLPPTPRPYYGGGKPLGAGVPGAVVQGAPRRHPDFAKAEGGYAGAGAGAGAAAAPARFPPSWPAGFPRAQPPSPQPPWRPPPPAQPPAGAAWPHQPYQHQGTAPGMTAGQIKRELTFPAECVEATVPTGEKRRRLTKADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHKSLGDVFDAPAPEDTPWYAPPRTPPPARPASPRRLAPPDPALRVRLLHGDNYTLETRRRQPVTVRSDDDLFAPDDDAPDAHHDILEPWQFGGDGGAAHFVPCLRLEAVHLPFARVLPGSRAPSPVPATPPPPAPAPATPRTPRAATPAPPDGDNLEAEPMELEPERRPELLIRDPAGVMKRRRLEDYEDECYTRDEPSLNLVDETRDALAKRCIALSNILRGLTFVPGNEVEFSRSSSFLAVAGKLLLLHHEHSPRAARARAYERAARDDADAAACCSSLRGGAEWWWDALAQLREDALVACANIAGGVELASQPEAVARPLLDGLLHWSVCPAAVAGDAGPGAGSASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGGAAREVAAHAPAVAQLVAFIERAEQAALGVVNQHGVAALRDNPDAMGTSLDMVRRAAATLLRLAEHRENRALLRRHERRLLALVMSQILDQKVAHELADVLYHCSQRRPDADV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -