Samb059928.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- -
- Assembly
- GCA_963921215.1
- Location
- OY992518.1:17652562-17653236[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1 1.8e+04 -1.9 0.1 40 55 9 24 7 27 0.56 2 2 1.3e-08 4.6e-05 25.6 8.1 4 48 166 210 163 213 0.93
Sequence Information
- Coding Sequence
- ATGGCTCTTTGGACGCCTTACGCCGAAGACTCCGCTCTGGACTTAACCAAGACAACATTGAAACAAGAACGGGAGTACAACACGTCTCCAAGTAGCAGCGAGCTGTCGTACGGATACGCGTATCCGCCGCACACGAGTCACCCCGAATATCCGACGTACACCGGTTACCCGTATCCGAATGCTGGCTTCACTTTGCCATCAGTACAAATGTCTCCTATATCGGGAGGCAGCAGTTGTTCCGGGTACGAAGCAGCTCAGATCAGTCCAACGTTTGCAGTGAAGCCTGGGACATTGTCGCCGCCAGAATCCCCCGTGTCGCAGCCTTCGAGGTTATCTTACATCGACGTGGACGCGCTGTCAGACGACCCTGACTTCCAAGCATTCGAGAGGAACGCTTTAAGGGCTATGGCTGAGAAAAATGGCGGAACTCTTTTGGGGAACAACCCAAGGATGCGGCGCGCAGTTCGTTCTTCCAATCAGGACGCCGCAAACGACTCGTACAGAAAGCAACGGGAGAGGAATAATGCTGCAGCGAAGCAGAGCCGCGATCGCAGGAAGCTCAGAGAAATCCACCTCGCCCTAAAAGTGTCGTATCTCAAGAACGAAGTGGCGTCTTTAAAGGCGAAATTGGCAGCTAAAGTGTGCAGTCGGTGCCAACAATTATGTGTGTGCTGA
- Protein Sequence
- MALWTPYAEDSALDLTKTTLKQEREYNTSPSSSELSYGYAYPPHTSHPEYPTYTGYPYPNAGFTLPSVQMSPISGGSSCSGYEAAQISPTFAVKPGTLSPPESPVSQPSRLSYIDVDALSDDPDFQAFERNALRAMAEKNGGTLLGNNPRMRRAVRSSNQDAANDSYRKQRERNNAAAKQSRDRRKLREIHLALKVSYLKNEVASLKAKLAAKVCSRCQQLCVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00681420;
- 90% Identity
- iTF_00683081; iTF_00681420; iTF_00682125;
- 80% Identity
- -