Samb026111.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- Xbp1
- Assembly
- GCA_963921215.1
- Location
- OY992507.1:6708695-6710575[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-18 5.3e-15 57.5 7.6 2 52 44 94 44 96 0.97 2 2 0.00024 0.82 12.0 0.5 33 55 89 111 89 116 0.90
Sequence Information
- Coding Sequence
- atgaGTGCACCGATAATTATCACGGTACCAAATAATTTCCTGACGGTGGAGGAAGTGGACTCTGAGGTGATGTCCGACGCGGAATCTCCACCACCGTCGAGGAAGCGGCGCCTGGACCACCTGACATGGGAGGAGAAGATGCAAAGAAAGAAATTGAAGAACCGTGTGGCGGCGCAAACGTCGCGCGACAGGAAGAAGGCTAAAATGGACGAGATGGAGTATCAGATCAAGCAGTTGGTGGAGTCGAACGAGCGTCTGACGAGCGAGGTGTCTAGTTTGAAGGCTCTGAACGAGCGTTTGTTGAGTGAGAACGCGTCGCTACGCAGCGAGGCGGCGGCGCGGACCGTCGCAGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGCAGGAGGGGCCCCTGACGGCGATCCGCGCGGCGCGCCTGCTGATGGCGATGTGCCTGCTCTCGCAGACATCCTCGCTCACCTCGACTCAGAAGAGTATCTCGACACCCTCAATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGCTGCAGGAGCGGTTACGGAtGTCCCAAACCGGGTCCTTGGACTGCGCCCTCAAGGAGTTGAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCGATGAAAGTGCAGTCATAG
- Protein Sequence
- MSAPIIITVPNNFLTVEEVDSEVMSDAESPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEYQIKQLVESNERLTSEVSSLKALNERLLSENASLRSEAAARTVAGARGPAESTPRQQEGPLTAIRAARLLMAMCLLSQTSSLTSTQKSISTPSINLQTPSSKKLMQVLQERLRMSQTGSLDCALKELKWWGPQQSTWNPMKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00682111;
- 80% Identity
- -