Sinc017835.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- GATA-B
- Assembly
- GCA_036419045.1
- Location
- CM071633.1:225072-232025[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.3 2.6e+03 -0.4 0.5 26 36 2 12 1 12 0.91 2 3 1.2e-16 1e-12 48.9 7.5 1 34 44 76 44 78 0.97 3 3 2.4e-19 2e-15 57.5 6.5 1 35 97 130 97 131 0.97
Sequence Information
- Coding Sequence
- ATGTgtgtattacaatataaacggTATGGACGTAAGAAGTGCCGCTCGCGTGGTGCCGGTAGTGGTGAGTGCGGGCTAACCGCTTGTTGCGCAGTGCCGGAGGTGGAGGTGGTGACGGAGGGCCGCGAGTGCGTGAACTGCGGCACGGTGCAGACGCCGCTGTGGCGTCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGCGGGCAGCAAGCGGCCCGGCACGACGTGCACCAACTGCCACACCACCACCACGTCGCTGTGGCGCCGCAACGTGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAGCGTCAACCGCCCGCTCGCCATGAAGAAGGATTCCATACAGaCAAGGAAACGGAAACCAAAGAATGCCATGAAGTCAGAGCGCAACATCAAGCAGCAGGTGCAGCGAACGCTCAATACTTTAAAGATGGACAACCTGTTGGACAACAGCGTGGTGCGCGTGGGGATGGGCGTGGGCTCGGCGCCCAACTACTTCGCGACGCACATGAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCACGTGTCGCACGCGGCGCACGCGTCGCACGCGGTGCACGGCCACGCGGCGCACGGCACGCACGGCACCCACGGCACGCACGGCGGGCACGCGCCGCTGGCGCACTACGAGGACGAGTTCCGGCGCGACGAGCGCCTGGAGCGGCCCACCGTCGTGTCGCTCGGCAGCTGA
- Protein Sequence
- MCVLQYKRYGRKKCRSRGAGSGECGLTACCAVPEVEVVTEGRECVNCGTVQTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLAGSKRPGTTCTNCHTTTTSLWRRNVHGETVCNACGLYYKLHSVNRPLAMKKDSIQTRKRKPKNAMKSERNIKQQVQRTLNTLKMDNLLDNSVVRVGMGVGSAPNYFATHMKLEEPPPAHAHVSHAAHASHAVHGHAAHGTHGTHGTHGGHAPLAHYEDEFRRDERLERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -