Sinc017838.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- gata5-b
- Assembly
- GCA_036419045.1
- Location
- CM071633.1:288954-295801[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-17 6.3e-13 49.5 3.3 1 35 375 408 375 409 0.97 2 2 4.6e-18 3.9e-14 53.4 6.7 1 35 436 469 436 470 0.97
Sequence Information
- Coding Sequence
- ATGGAGGCTGCAACCGGACTAGGCAGAGTGGAGGGCGAGGAGCAGCACGAGCAAGAGCCCACCGCCGAGGCTCTACAGCTGGTCAAGAACGAGGAACGCGCCGACCTTGCAGAGGGTGGTGTCGGAGCTGTGGGCAATATAAGTGGAGTCGGCGGTGTCGGTAGTGTTGGCGGAGTCGGCGGGAGCGAGGGCGCCACGCACTCCGTGATCACGCGGCGGGCCGTGCGCACCATCACAGCAGCGGGCCACATCGAGGAGGCGGCCGAGGACGACGTGAAGGACGAGCCGGCCGAAGGGCCGCCGCCGCTGCCCTCGGAGCGCGACGCGCCGCCGCCCTATGAGCCCTACGACGAGCGTCGGCCGCCCACCGATTACCGCGCCTGTCGCGCCGCGCCACGCCCCTACGCGCGCTCGTTACCACTTCGCTATGGTGCTCCTCACCACGTCATTGTTTCCAACGAGGCCGCGGAAGATGCAGACGCATTTTTAAACAAGGAAAAAGAGTTGCCTCCGTACGAGGCCGCGCCATCCGACACGCGGCAGTACACGACCTCCGCTCTCGGCGACTCGCTCGAGATGATCCAAACGACGGCACTCGGCAACCAGCAGGCGGTTGGCGTGGCATACCAACCTGTGAAATACGAGTCGCGCGCGGAGGAAAGACCATCCACGTACGCGAGCCTGCAACCAGTGACTTCAGTCGGCGGTGGCTATTACCAACCAGGGTACGGCTACGGCAAGGAGCTGCTGACGCTGTACGGGCGCGGAGACGAGTCCCCACCCTCCCAATTGCTATACCGCGGCGACCCTACCTTGTCCTCATCCTCGCAGCGCGCTCACGTTGTGTACGGGCCTGTAGTACCGCAGACACAGCCAGTCTACGAAGCGCCGCCCAGCCCCAACTCTCAGCAGGTGACGCTGTACACGCATGGCAACGCAGTGCAGTATAAAGTAGGAGAGTACGCAGCGGTGGGCGGTGGCGGCGTGGAGTACGTGGTGCCGAGTTACGAAGGCGGGCTGCTGGTGGAGGGCTACCAGCCGCAGCCCTGGCCCTCACCCGCACTACTGCCTATTGACGACTCCTTCGACCCCTCGATGGCGGGTATGGGGGAGGTGAAGGAGTGTGTGAACTGCGCAGCGGCCACCACCCCGCTGTGGCGGCGTGATGGTACAGGCCACTATCTGTGCAACGCGTGCGGACTCTACACGCGGATCAACGGCGTCAACCGGCCGCCGCTCAAGGGGCAAAAGGCTAAGCCTCCCCAAGCACTGCCGACTAACGGCAGCCGGCGCGCGGGCGTCACTTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGCCGCAATAACAACGGGGAGCCCGTCTGCAACGCCTGCGGCCTCTACTTCAAGCTACACAATGTAAATCGACCGCTAAGCATGAAGAAGGACGGCATCCAGACACGCAAACGCAAGCCCAAGAGCATGGGTCACGTTCCAGCGCGCGCGCAGCCCGCGCTCTCCGCGGAGGCGGCGGCCAAGGGGCTGCCCCCGCTGTACGCGGCGGTGGAGGGCGCGGCGCCGCCGCTGCCGCCCGCGCACGCCTGCGGCACGACGCGCAAAATTGTCGAGTATCTCGTGCTACTCAGGTTGTGGTCTGGTCTCTTCTCGCTCGCACCTGCCGCCTTCCAGCTATCCGTCTCTGTCGCACGTCGTGTTTGCATGACACGCTATCTCAAGGTTCTTTTCAGCTCTCTTCAGTTACTTTACGATGTGTGCTCACCTACACGGCTGCTTGCTCTAGATTACAGTCAAGTGCTTGTTTTTTCTAATGGCTCTGCGATGACTATGTTGGTACCATCGCTAGAGCGCGCCATGCTGTGCCGGCCGCCGCCCTAA
- Protein Sequence
- MEAATGLGRVEGEEQHEQEPTAEALQLVKNEERADLAEGGVGAVGNISGVGGVGSVGGVGGSEGATHSVITRRAVRTITAAGHIEEAAEDDVKDEPAEGPPPLPSERDAPPPYEPYDERRPPTDYRACRAAPRPYARSLPLRYGAPHHVIVSNEAAEDADAFLNKEKELPPYEAAPSDTRQYTTSALGDSLEMIQTTALGNQQAVGVAYQPVKYESRAEERPSTYASLQPVTSVGGGYYQPGYGYGKELLTLYGRGDESPPSQLLYRGDPTLSSSSQRAHVVYGPVVPQTQPVYEAPPSPNSQQVTLYTHGNAVQYKVGEYAAVGGGGVEYVVPSYEGGLLVEGYQPQPWPSPALLPIDDSFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPPQALPTNGSRRAGVTCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKSMGHVPARAQPALSAEAAAKGLPPLYAAVEGAAPPLPPAHACGTTRKIVEYLVLLRLWSGLFSLAPAAFQLSVSVARRVCMTRYLKVLFSSLQLLYDVCSPTRLLALDYSQVLVFSNGSAMTMLVPSLERAMLCRPPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -