Sinc017841.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- pnr
- Assembly
- GCA_036419045.1
- Location
- CM071633.1:437408-481256[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-18 7.2e-14 52.5 3.5 1 35 183 216 183 217 0.97 2 2 7e-18 5.9e-14 52.8 5.7 1 34 237 269 237 271 0.98
Sequence Information
- Coding Sequence
- ATgttcggcggcggcggcggcggcgtgggtGGCGTGGGCGGCTACGGCGGCGACTGCGGCGAGTGGCCCGCGTACGGCGTGGGCGGCGCGCGGCTGCAGCAGTACGCCTTCCCTCAGGGCGCCTGGCACCACCCCGCCGCGCACCACGACGCATACGGTGGTGGTGGCGTGGGCGGCGTGGGCGGCGTAGCGGGCGTCCCGGGCGGCCTGTACTCGCAGAACGTGGTGGTGGGATCGTGGTGCGCGCCGTACGACGCATTGCAGCGGCCCCCCGCTTACGATAACACGACATTCCGTTTATCAGTTGGTCTTCCCCTGGGAGCGACCTGCGTTGTGCCACATCGCTGTCGTGGTGATCATGTTGACCAACTAGGTCATCACGGCCTATCTTGCAGCAGAAGCGCGGGGCGTGCCTCTCGCCATGCCAGCCTTAACGACGTCATCCGTAGGGTCTTAGCTAGTGCGGGAGCACCGGCTGTTCTAGAACCGGCCGGCATTAGCCGTGACGACGATGGCAGCGCTGAATACGAAGACGGTGGACGCGAATGTGTCAACTGCGGCGCGAGCAACACGCCGCTGTGGCGCCGCGACGCGACCGGCCATTACCTGTGCAACGCGTGCGGACTCTACACGAGGATCAACGGCGTCAACCGGCCGCTCGTCCGCCCCGCCAAGCGGCTGAGTGCGGCGAAGCGGCACGGCCAGTGCTGTACTAACTGCGGCTCGCGGCACACCACCCTGTGGCGCCGCAACAACGACGGCGAGCCGGTCTGCAACGCCTGCGGGCTCTACTACAAGCTGCACGGCATCAACCGACCTCTGGCGATGAGAAAAGACGGCATCCAGACGAGGAAACGGAAGCCCAAGAAGTCTGCGAGCGGCGCGAAACCAACGCAGGAAGCTAGCAAGAAAGAGGGACAAAGCTCGCCTAGTATAGACGAAAGCAAATCGTCGGCGGAGGTGCCACTGCCGCTGACTTCGCAGACGGGCAAGGCGCCGTCGCTGGCGCTCGCCGGCCACGGCCACGGCCTCGGCCACAGCCACGGCCAGAGCCACGGCCTCGGCCACAGCCACAGCCACAGCCACGGCCACAGCCACAGCCACGGCCCCGGCTCCGGCCACGCGTCGCAGCCGTATGCGCACGCGCAGTCCGCGGCGCCGGCGCACGCGCACTCGCACGCGCACGCGCACACGCACGCACACAACCAGTACGCGCTCGGCCTCAACGCACAGGTTGTTGTTTCTTTTGACAAGAAAACTCATCGTCTTCCCCTGATCTTAAAGTCACTGGTAGCTAGTGGTGATGGATGTGACTGGACAGCAGTTCAGAGAGATGAATGA
- Protein Sequence
- MFGGGGGGVGGVGGYGGDCGEWPAYGVGGARLQQYAFPQGAWHHPAAHHDAYGGGGVGGVGGVAGVPGGLYSQNVVVGSWCAPYDALQRPPAYDNTTFRLSVGLPLGATCVVPHRCRGDHVDQLGHHGLSCSRSAGRASRHASLNDVIRRVLASAGAPAVLEPAGISRDDDGSAEYEDGGRECVNCGASNTPLWRRDATGHYLCNACGLYTRINGVNRPLVRPAKRLSAAKRHGQCCTNCGSRHTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGAKPTQEASKKEGQSSPSIDESKSSAEVPLPLTSQTGKAPSLALAGHGHGLGHSHGQSHGLGHSHSHSHGHSHSHGPGSGHASQPYAHAQSAAPAHAHSHAHAHTHAHNQYALGLNAQVVVSFDKKTHRLPLILKSLVASGDGCDWTAVQRDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -