Sinc034924.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- Znf541
- Assembly
- GCA_036419045.1
- Location
- CM071643.1:8088895-8107236[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-09 1.7e-05 26.2 0.0 3 46 652 695 650 695 0.96
Sequence Information
- Coding Sequence
- ATGGATAATTGGATCGCCGAGTTGTTCCAAGCGCCCGCGAGGACGAAGGCGCAGCAAGCGAATCTGAAGAGCAGTGGCTTGTCTTCTAGTGGGGCGGCAAGCACAGCGACTAGTGGGCCCACGAGTTCGAGCAGAGCAAGCGACGTCAAGCCAGTAGAGTGCAACCTCTGCCACCGCAAATTCAAAAACATACCTGCCTTAAATGGCCACATGAGATTGCACGGTGGTTATTTTAAAAAgGAGTCAGATAATAAGAAATTGGATAAGAAGGAAACCACGGGGCCGCCTTTACAGACAGCCTCCGTATCAGTAAGAGCTCTAATCGAGGAGAAAATTATCAGCCGACGAGGAGCCACAGTTTCTTCGTCAAgtACAAATGCGGACAATGCGGTTTCGCGAGCAGGTTTCGTGGCCCCCGCACCGCCACCATTGTCAACCATCCGAGGGTCCGTGGCGTCCCCCGCTTCCCCCGCAACCACTGCCCAATTTGCGTCTCCGCGGGCACCTGTCGTCACCGTGTCCGCAAACATTACCACCAATCTTGGACAGAGGGACTCTGCGTTAATTGAGCTGTTAAAAAAAGGAAACAGCACAAAGGTTGTCAAAAGATCAGCTTCGGACCCGGGACAATCATCGCCTCAACAAGACTTCACATTTCGTCCGGAACTCTTTGGTGTTTCATTCAACTCTGACGATGGATACTTTTCTCCTGCTCTCAACGAAGACACCTTTCAATTTGCAACTACACCTGAACAATTGGACGATCTCGCATCATTGGAAGATTACGCTACAGTCGCAGCATCGATAAGAGAAAGATCACCTGTTCCATTTCCGTCTAGTAGAAGGCTAGCAGCGGTTTTGAATTCCCCGCTACCGGAATCATTGGCGGACTTTGGAGCATGTCACGGTGGATCCCCTGTGCCGTCTCCTGGTTTGGGTTATGCAGCGAATTCTCCCGGATTGTCATACTCTACGGGAGACTCGCCAGGGCTGGCTTACACAGCTGTTTCGCCTGGCGGCAGTTACTCAACACAGCCCGAAGCCTCGCCGGGTCTCGCGTATCCTACACCACCTGCATCACACGATGCTCATTCACCAGCACATACTGTACCGCGGGCGTCATCACCATTGTCTACTGCTTTTTTTACTGCTACTATGTCTAGTCAAGAAGAggttgAAGAAGCGTTAGAAGAAGTATTACCAGAGGAGTGTCGGTCATTAGACGCATATGCATTAGAACCATCACCTGCTCCAAGACGAATAATGTTAAATTCTGAAGATCCTTTACTATCAAGCAGTCCTAGAGACTTTTCACACCAACGGCCTTTGAAACGATATCACAGAATTAACTCTACTGTTTCTTCCTCAATGGATCAATGGCAACACGACACTTCTCTTCAAGTATGCGTGGAAGGGCGTGACTCAGTGCCGGCGGTATTCCTAAGCCCAAGCAGCGTGCCAGCGTCGCCGCAGCGGCGCAAGCGGCGCGCATCACCCGCCGGCCCGTATCGTTCACGAATGCGCCGCACCCACACGCACTACGTGCCGCATCCGCTCCTGCCGCCCGACAGAGACGGCACAGGACTATTCGCTGAGATATGTGGTCTACCGTTATCGGAAAATGACATGCTGTCCCACATGGAGGAGCAAAGGAAACCTCAAATCAACATGGGTAGGGAGTACCAGGCAGAACTGCCGGAGCTGTGCACCGACCGTGTAGACCTCCACCGCGCACCCGAGCAACTTCTGTGGGACCCCGGCATCAACGACTGCCTCGACGATAACGAAGTACGCATGTTCATGGAGCTGGCGATGTGCGCGGCGATGCCGGTGGGCGGCCACTCGCGCGAGTTCGCGCTGCAGACGCTAGGCGAGTGCGGCGGCGACGTGCGCGCGGCCACGCTGCGGCTCATGTCGCGGCCCGCGGGCGCGCCGCCGCAGCCGCCGCAGCCGCGCTGGGCACCCGACGAAGTGGAGGCCTTCCTCGCCGGTCTGCGCCACTACGACAAGGACTTTCGCAGGATTGCCCACCTGGTGCGAACGAAAGATTCGAAGCAGTGCGTCCAATTCTATTACTTCTGGAAGAAGGTGACCAAAGACTACAAGACGCTGTACCTGCGGAGCTGGAACACGGAGCACGCTACACAAGGTTCAGTAGCGCAGAGCGCGGCGCCCTCGCCATCGAACGAAGGCGACGAGTACCCCTGCAAGATCTGCGGGAAAGtttttaacaaagtaaaaagtCGTAGCGCGCACATGAAGTCGCACCGGCCTTTGGACGCCGAACCGAAAAGGGCCAAATTCGAAAAGCCTTATGAAAAGGTCAATGCTTAG
- Protein Sequence
- MDNWIAELFQAPARTKAQQANLKSSGLSSSGAASTATSGPTSSSRASDVKPVECNLCHRKFKNIPALNGHMRLHGGYFKKESDNKKLDKKETTGPPLQTASVSVRALIEEKIISRRGATVSSSSTNADNAVSRAGFVAPAPPPLSTIRGSVASPASPATTAQFASPRAPVVTVSANITTNLGQRDSALIELLKKGNSTKVVKRSASDPGQSSPQQDFTFRPELFGVSFNSDDGYFSPALNEDTFQFATTPEQLDDLASLEDYATVAASIRERSPVPFPSSRRLAAVLNSPLPESLADFGACHGGSPVPSPGLGYAANSPGLSYSTGDSPGLAYTAVSPGGSYSTQPEASPGLAYPTPPASHDAHSPAHTVPRASSPLSTAFFTATMSSQEEVEEALEEVLPEECRSLDAYALEPSPAPRRIMLNSEDPLLSSSPRDFSHQRPLKRYHRINSTVSSSMDQWQHDTSLQVCVEGRDSVPAVFLSPSSVPASPQRRKRRASPAGPYRSRMRRTHTHYVPHPLLPPDRDGTGLFAEICGLPLSENDMLSHMEEQRKPQINMGREYQAELPELCTDRVDLHRAPEQLLWDPGINDCLDDNEVRMFMELAMCAAMPVGGHSREFALQTLGECGGDVRAATLRLMSRPAGAPPQPPQPRWAPDEVEAFLAGLRHYDKDFRRIAHLVRTKDSKQCVQFYYFWKKVTKDYKTLYLRSWNTEHATQGSVAQSAAPSPSNEGDEYPCKICGKVFNKVKSRSAHMKSHRPLDAEPKRAKFEKPYEKVNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00279607;
- 90% Identity
- iTF_01334401; iTF_01331453; iTF_01332184;
- 80% Identity
- iTF_01334401;