Sinc039789.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- -
- Assembly
- GCA_036419045.1
- Location
- CM071646.1:17266978-17283108[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-07 0.0011 20.5 0.0 5 46 193 233 193 233 0.95 2 4 0.05 1.5e+02 4.1 0.0 20 46 301 326 296 326 0.90 3 4 0.05 1.5e+02 4.1 0.0 20 46 427 452 422 452 0.90 4 4 1.3 3.9e+03 -0.5 0.0 31 46 558 576 554 576 0.82
Sequence Information
- Coding Sequence
- ATGTTTGACGAGCAAGGAGCAACAGAGCGCGTGGGCACACCCCATAGCGTGAGCAGCGTTGGAGCGCCGCCCGCGCCGACCCCGACGCCGACGCCAACGCCGACGTCGACACCGACACCGCCCGTGGGCAGCACCACCGGGGCATGCGCGCTGTGCGGCGCTCCCAACGCCACGAGAACTGTACCCAGGAGTCGAGCGCCACAGTTAGTAACAGAGGATTCGTTAGTCGGGGATGAAGTGCGCGCGTGCGTGTCGTGTGCCCGGGGATCGAGCGGGGCGCGATCCAGGGGAGGCGCGTGCGCGGTGGGCAAGTGCGCCAGCGCGGGGGGCGCCCCAGCCTCAGCGGCGGGGGCGGGAGCGGGTGCGGCGGCCGGCGTGGGCGGCGCGCCCGGCGCCCGGCCTCGCGCGCGCCGCCTGCGCCACCTGCCGCCGCGCTGGCACGACCTGCCGCTCGACCTCAAGCGGCCCATCATGGATGACTTCCAAATTCCCAGCGATCTCAGCAAATGCTGCATAGGGTGCTACAAGAAGATCACGCGGCGGCTGGAAGCCGTGGGCGAGGGTAGCGGCGAGCCGTCGGAGGAGGAGCTGGCGCGGTTCCGCACGCTGCTGCGGCAGCACGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTCGGCGCTACCAGTGCGCGGACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGCTGCGTACAGTGCGGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGGGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGGGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGGGGCACGCACTGGGACCGGCTGGCCGCGCTCTgcggccgcgccgcccgcctcgCCTTCCTCAAGGCCTACTCTACTACACGTTACACGGTGCGTACAGTGCGGGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGGGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGGGGCACGCACTGGGACCGGCTGGCCGCGCTCTGCGGCCGCGCGGCCCGCCTCGCTCAAGGGCCTTCTACTACACGTACAGGTGCCGTACAGTGCGGGGAACGCACTGGGACCGGCTGGCCGCGCTCTGGCGGCCCGCGCGCCGCCTCGCTTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGCGGGAACGCACTGGGACCGGCTGGCCGCGCTCTGCGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGTGCGTACAGTGCGGGGAACGCACTGGACCGGCTGCCGCCGCTCTGCGGCCGCGCGCCCGCCTCGCTCAAGGCCTTCTACTACACGTACAGGAAAAAATACCAATTAGAAGCGTGCATACCGCGACCTACTCGGGACGGCACAGGCCCCAATACTGGCACGACCGGTCCGGCCACCGGTCCTCTGCGGGAAGTGGAGTGGTCATCTTCTTCCGACGCCTCCTCTTCTTCGGGCGGGGAACCTCCGCCGCCTCCCGCCCCCAGAACTGATGCGGCTGCTCCAAGAAGAAGGGATTACGATTCATCGGCCACCGAAACGGCCGATGAGGACTCTGAGCCGGCTAAGATCTTACCACCCACGTCGTTGCCGCCGACGCCTACGAACGCCGTGACGTCGGTGAACACGAGCGCGGCCAGCTCGGTGGGGGGCACCATTACGGCCGTGGGGTCGGTGGGGTCGGTGGGGTCGGCGGGGCCGGTGGGGCCGGCGGGGCCGGTGGGGCCGCCCGCGGGGGCCGGCGCGTGCCAGGCGCGCAACGGGCCCGCCGCGCCGCTCACCGTGCGGGACGTGGTGCTCAACATGATCGAGATCAGCTTGACGAAAAACAACCAGCCTCAGCCGCCGCACCCCAAGCCGCACCTCAAGgTGACCTCGACAACCGGCACGAGAGAAAGTCTCGCCACGTTGAGCGTTGTGAGCGGGTCGCACAGCGCGCGGAGCTCGCCCCGCTCGCCGCAGCGGCCGGCCACCATCACGCCGCtgcagccgcagccgcagccgcagccgcaCGGCCCGCACGGCCCGCCCGGCCAGCCCGGCCCGCACGGCCCGCACGGCCCGCCCGGCCCGCACGGCCCGCACGGCCAGCACGGCCAGCACAAGGACGGCGTCGTGGTGCTGCACATCGAGCACCGCGACCGCAACGAACCGCTGCTCGACCTCAGCGTCAAGAGGCCGAGAATGGACGCGTTCCCGCACCCTAGCAAACCGCAGACGTACCGTAACTCCGATTACCCGAGCGGCGTATCGGCCGCGTACAACTGCAAGGGCAAGAGTGCCGGCGTGGGCAGTGTGGGCACGGGCCCAGCGGTGGGCGTCACCCGCACCGCCCTTAAACCTCTGCCCAATGCAAAAGGATCCATCACTCTGGGCACGCCGCTAGAGACCAGGTTCGAAGCCCAGCCAAGACGAACACCTGAACCCAAGGGCGGGTCCATAACCGCCGGCACCCCAGTGGTCCAGACGGGAGCAGACAAGCGCGCCTTCGACTACTACAAGAGGCGTAGTCCAGGGGGGCCTTACTACCCCCGGCCGCATTCACCTAGCTATTCTacgCCACAACAAGTAACCGGCGGCAGCGGTCCAAGTTCGGGCAACTCCGCGAACGCAAACGCTAATGCGGCGTATTCCCGAAGTCCGTACGGGCTGGAGCAGCGACAGATCATCATGGCGGACTTCATCACGTCGCAGCAGATgcacggcggcgcgcggcggcccGAGCGCGAGCGACCCGAGCGGCCCGAGCGCCCCGAACGACCCGAGCGCGGCGAGCGGCCCGAGCGCGGCGAGCGCGCCGAGCGAACCGAGCGCGCGGACGCCGCCGAGTACCGCCGCGAGCCCGTCTCCGTCATCCAGCGCCACACGCCGCTGTACCACCAGCACCACCCGCTGCCGCACCAGCAGCACCCGCACCAGCACCCCCACCCCCATCCGCATCCACCGCCCGGTCACGAAGCCTTCACATCGCTAGTGGATGTAGCGTCAGCAGCGTCAGCGCTTCCCGTGCCCGGCTCCGTAGGAGCCGCTCCTGGGCAAGGTCCAACCCGGGTTGAACCCAAGGTTGAACCCAAGCAGCACCATCCGCAGCATCATGACATCAGATTACAAGATCGAATACAAAGGGACATTGTGATGGCGCAAAAGTACCACCAACAACATTTACAGTATCAGGTGCTAGAACGAGACAGACGAGCGCAGCAAGCGCAATACTTAGAAAGGGACAGGCAGATAGCGTTACAACAAAACAGAGACcggtaa
- Protein Sequence
- MFDEQGATERVGTPHSVSSVGAPPAPTPTPTPTPTSTPTPPVGSTTGACALCGAPNATRTVPRSRAPQLVTEDSLVGDEVRACVSCARGSSGARSRGGACAVGKCASAGGAPASAAGAGAGAAAGVGGAPGARPRARRLRHLPPRWHDLPLDLKRPIMDDFQIPSDLSKCCIGCYKKITRRLEAVGEGSGEPSEEELARFRTLLRQHGTHWDRLAALCGRAPASLKAFYYTYRSALPVRGRTGTGWPRSAAARPPRSRPSTTRTGCVQCGHALGPAGRALRPRARLAQGLLLHVQVRTVRGTHWDRLAALCGRAPASLKAFYYTYRCVQCGARTGTGWPRSAAARPPRSRPSTTRTGAYSAGHALGPAGRALRPRRPPRLPQGLLYYTLHGAYSAGHALGPAGRALRPRARLAQGLLLHVQVRTVRGTHWDRLAALCGRAPASLKAFYYTYRCVQCGARTGTGWPRSAAARPASLKGLLLHVQVPYSAGNALGPAGRALAARAPPRFKAFYYTYRCVQCAGTHWDRLAALCAARPPRSRPSTTRTGAYSAGNALDRLPPLCGRAPASLKAFYYTYRKKYQLEACIPRPTRDGTGPNTGTTGPATGPLREVEWSSSSDASSSSGGEPPPPPAPRTDAAAPRRRDYDSSATETADEDSEPAKILPPTSLPPTPTNAVTSVNTSAASSVGGTITAVGSVGSVGSAGPVGPAGPVGPPAGAGACQARNGPAAPLTVRDVVLNMIEISLTKNNQPQPPHPKPHLKVTSTTGTRESLATLSVVSGSHSARSSPRSPQRPATITPLQPQPQPQPHGPHGPPGQPGPHGPHGPPGPHGPHGQHGQHKDGVVVLHIEHRDRNEPLLDLSVKRPRMDAFPHPSKPQTYRNSDYPSGVSAAYNCKGKSAGVGSVGTGPAVGVTRTALKPLPNAKGSITLGTPLETRFEAQPRRTPEPKGGSITAGTPVVQTGADKRAFDYYKRRSPGGPYYPRPHSPSYSTPQQVTGGSGPSSGNSANANANAAYSRSPYGLEQRQIIMADFITSQQMHGGARRPERERPERPERPERPERGERPERGERAERTERADAAEYRREPVSVIQRHTPLYHQHHPLPHQQHPHQHPHPHPHPPPGHEAFTSLVDVASAASALPVPGSVGAAPGQGPTRVEPKVEPKQHHPQHHDIRLQDRIQRDIVMAQKYHQQHLQYQVLERDRRAQQAQYLERDRQIALQQNRDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -