Sinc021963.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- Dnajc1
- Assembly
- GCA_036419045.1
- Location
- CM071635.1:4952092-4961778[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-06 0.0045 18.5 0.0 2 34 294 329 293 335 0.85 2 2 3.4e-05 0.1 14.2 0.0 2 35 373 412 372 413 0.87
Sequence Information
- Coding Sequence
- ATGCACTACGTACATTGTATAGTTTTACTACTTGTAATCACAAGTAATTCGGTTAAAGGATGGGACGATGATGATTTGGAAGTGTTTGACGTGGTTGAAGAAGTAAACCAAAATTTTTATGAACTTATAGGTGTTACACAGGAAGCTTCACAAGCTGAAATCAAATCGGCCTTCAAAAAACTCACACTGAAACTGCATCCAGATAAAAATGATTCTCCAGATGCTGATGTACAATTCAGAAATCTAGTGTCTGTTCATAATATCCTCAAAGATCCAGGGAAGAGAGAAAAATACAATGAAGTTCTCAAAAATGGTCTGCCAAATTGGAGATCTGCTATTTACTACTACAGACATGTCCGAAAAATGGGTCTAGCTGAAGGCTCAATTATATTGttcattattataacattttcacaATATGCTGTTGGCTGGGCAGCATATGCAGAGAAAAGGTTTACAGCGgaacaaatattaaatagtagaggaaagaaacatacaaaaaaatcaGGTTTTGATGCCGGCCTAGCTGAAATATTAGAACAACTGCCTAAACCCAGCATAAAGGACACATTGCCTTTCCAAATACCACGGCTTATTTGGTGGTTAATAACTGCCATTCCTAGGAGTATTGCAGAGATTAGAAGAATTATGAAGGAAAATGAGGAGGAAGCAAAGAGGCAGAAGaaaaaGGAGGAGGAAGAACGCTTACGCGCTGAGAGGCAAGCAGCGCAGGCGGCGGAGAGTCGCGCGTCCaccgcgcggcggcggcgcgccttCGAACCGCCCGCGCGCGACCACTGCACGCCCGACGCCGCTGACGAACCCGAAGGACCCGTTGTTGTGCCCGTCAAACCAACCAGTCCACCTGTAATCAGCGGTGGTCTATGGACTGATGATGACTTAACAGAGCTGGTCAGGCTCGTAAAGAAGTATCCAAGTGGCAGCGCTGAGCGCTGGGAGAGGATAGCCGAGGCTATGAACCGTCCGGTCGGCGAAGTCACGCATATGGCGGCTAAGTTGAAGGACAATTGCTACAGGCTGCCGCAGCAGGAAGAACCGCCTGTGGTGGAGCCACCCAAAAAGGTGAAGACGCGAAAGGCAGAAGAGACGAGCGCGGGCAGTTGGTCGCAGAGCCAGCAGCGCGCGCTGGAGGCGGCGCTGGCGCGGCACCCCAagggcggcgccggcggcgagCGCTGGGCGCGCGTGGCCGCCGCCGTGCCCGGCAAGTCCAAGGTACCCACCACCTCACCACACGCACTGCTGGCACCTCACCTCGCCGGCTCACCACACTGA
- Protein Sequence
- MHYVHCIVLLLVITSNSVKGWDDDDLEVFDVVEEVNQNFYELIGVTQEASQAEIKSAFKKLTLKLHPDKNDSPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGSIILFIIITFSQYAVGWAAYAEKRFTAEQILNSRGKKHTKKSGFDAGLAEILEQLPKPSIKDTLPFQIPRLIWWLITAIPRSIAEIRRIMKENEEEAKRQKKKEEEERLRAERQAAQAAESRASTARRRRAFEPPARDHCTPDAADEPEGPVVVPVKPTSPPVISGGLWTDDDLTELVRLVKKYPSGSAERWERIAEAMNRPVGEVTHMAAKLKDNCYRLPQQEEPPVVEPPKKVKTRKAEETSAGSWSQSQQRALEAALARHPKGGAGGERWARVAAAVPGKSKVPTTSPHALLAPHLAGSPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433100;
- 90% Identity
- -
- 80% Identity
- -