Sinc018392.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- -
- Assembly
- GCA_036419045.1
- Location
- CM071633.1:10067010-10071224[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 8.3 2.5e+04 -3.1 0.1 4 16 159 171 159 173 0.91 2 6 4e-13 1.2e-09 39.6 0.5 1 45 263 309 263 310 0.95 3 6 1.1e-07 0.00032 22.2 0.4 2 44 316 362 315 363 0.93 4 6 4.7e-09 1.4e-05 26.6 0.0 1 43 368 410 368 412 0.97 5 6 0.00027 0.81 11.3 0.0 4 42 420 460 418 464 0.92 6 6 3.9 1.2e+04 -2.0 0.0 29 41 501 513 498 515 0.88
Sequence Information
- Coding Sequence
- ATGGATATTAATACAGATAGTTATAATGAGCTGAATTCGGGACCACAGCTCAAGGATTTGGTACATTTAACTTCTGTCTTGAGATTCGGGCTTTTAGCGAACGACACATCTGGGCAACAGCTCAAGCCGCAGCCTTTACCGTCCTGTTCCACCGCAAGCGACACTTCATCTTCAGAATTGGAACAAACTAAAATCGAATCAACATTActtcttaataaaaaattgactgaAGCGTTACTTAACGTGGAGAACTTTCTTATCAACAAGTTGCTGAATGGCGAAAATAAGTCATCAGAACAATTCAATCGAAACCCAAAACAACTCAACTCTAACACGCCTCTATTTCGGACTACACAAGGTAATAATCCATTTTTCATGGATTGTAAAGGCTATGTCCCTCCTGACAATAAAGATACAGTTCAAATGAAAAGAGATGGGATGTACCTCTTTCCAAGTATGTTTGTTGGATTTGGATGGTCAGTCAAAGATAAGCGTATATTTGAAAAGGCAGTACTTGAAGCATCAAAATCAATTagaataaatgaattaaatagtaaaatttctAAAATACAATGTGATGCAAATATGAAcagttctaaaaaaaaaaatgaaataaaagacTTAGAAGAGGAGATTAAGTCAGTTAAAAGGAATGGCACTTTAGCACAATTAGCATTGCCAATTAATGAAGAATATTATTGGTATAACTTGATGCCATCAGAATCCAGACATACTCCAGAAGAATATTCTAGAATGTGGAAATTATTTGCACATCCAAGTCTGAATAAGAGTAACTGGACAAAAGAAGAACACAAAAAATTGATATGTATTGCACAAGAGCACAATTATCAAGATTGGGATGCCATAGCAAACAAACTAAACACAAATCGATCTGGTTTTCAATGCTTGGTTTACTATAgaacaaatttcaataactctAAAAATAATAGGTGGACAGCAGAAGAAGAAGAGTATCTGAGAAGAATAATTCATTACCATAGAGAAGATAATTACATACCATGGGGACAAGTGGCAGCATGTATGGATAATAGAACCAAAATTCAAGTTTACAATAAGTTTAAAAGGCTTAGTGAACTAAGGAAAGGCCGATTTTTGCCTGAAGAAGATTCTGTATTACTTAGCTGTGCCAAAAAATTTGGTTTAgtctttagtaaaataaaaaaagttataccAGGAAGATCTGCTGATCAATTGAGAGCTCGTTATCAggttttgacaaaaaaaatttCAGCAGTATGGACTGTTTCTGAAGATAAAAAACTATTACAATTAATGGCGGGTCAAGGGGAGAATTTGAATTATGCTGCTTTATGTCCATTTTTTCCTGATAAAGATCGTGCAAACATAAGAACTAGATATGGAACATTAATAAAGTGGTTGTTTAAAAACCCAAATGTTGATATTGCTTTTGCTCCTCGTCGTGCAGCTCGTCGACTGTGCCACGGTCAAGCTGAACATTCTATTAGAAAGGCTTTAACTAAGTTAGAAAGTAGAATGCAAAATGAAGTCAAGCTTCGTATGTCTAAATCTAAATCTAAGAGAGTCACTAAGGATTCATCTTTTGAAGAAATAGAAGAGGCTGTTATTGCATTTTTAACTACAGAGAACATTCAAGAAGGGGAAAGTTCTTtactggatcttctgctgaccacacgtccGGACGGATACACCATCACAGTGGATGCACCCCTCGGTTCGTCCGACCACTGCCTCATCCGGACAAAAGTACCATGTGCGCAGCCAATTACATCTAGGCCGAAACACCTACGTCGCATGTGGCAGTACAAGTcggcagattgggatggattgcgtCAATTCTAcgcatcgtacccgtggaggcagCTTTGCTTCATATCAGATGATCCCGACGCCCCTGCAGCCGCTGTCGCTGAGACAATCCTAGTGGGTATGGTATATTTTAAACCAAACGCACTGGTAGCTGCGGGGCAAAAtaaacgaccgtggtttaatcggtcctGCAAGGAAGCTAGACTTCGGAAGCAGACCGCATACAGGGCTTGGACCACGGCTCGTATCAACAAGGATCCGAACGTCTCTGATATGAAATGCAAATACAATGCTGCTTCGAGGTCCAGTAAGAGAATTATTGCCAGAGCCAAATTCGATTTCATCAGTAGAATTGGTGAGCGACTCACGGGCTATCCCTCTGGGAGTCGTGCCTTCTGGTCGCTTACCAAAGCTGCCGAGGGGAACTTTTGCCAgccgtccttaccaccactgcgAAATGTCGATGGCAATCAGGCCCACAGTGCAAAGGAGAAAGCCGATTTATTGGGTAatctctttgcctcaaactcgactttGAACGACATTGAGGGCGATTTGCCGCCTTCGATCCCTTGGTGTGGATTCTCTATGCCAGAGATAAATATCTCTCAGAGGGACGTACGGCGAGAGCTGCTTTCTTTGGACgttcataagtcgagtgggccagacggcaTACCAGCAGTGGTGCTCAAACAGTGTGCCCCTGTGTTGTGCCCTGTGATAACGCGACTTCTCGCGCTTTCTTACCACACTAGTCAAgtgccatcttcgtggaagactgCCAATGTGCatccggtgcccaaaaagggcgataggtcggacccatcgaattacaggcctatagcTATAACCTCTCTTCTCtctaaggtgatggagcgtgtgatgtttatcacacgctccatcaccttagctccttag
- Protein Sequence
- MDINTDSYNELNSGPQLKDLVHLTSVLRFGLLANDTSGQQLKPQPLPSCSTASDTSSSELEQTKIESTLLLNKKLTEALLNVENFLINKLLNGENKSSEQFNRNPKQLNSNTPLFRTTQGNNPFFMDCKGYVPPDNKDTVQMKRDGMYLFPSMFVGFGWSVKDKRIFEKAVLEASKSIRINELNSKISKIQCDANMNSSKKKNEIKDLEEEIKSVKRNGTLAQLALPINEEYYWYNLMPSESRHTPEEYSRMWKLFAHPSLNKSNWTKEEHKKLICIAQEHNYQDWDAIANKLNTNRSGFQCLVYYRTNFNNSKNNRWTAEEEEYLRRIIHYHREDNYIPWGQVAACMDNRTKIQVYNKFKRLSELRKGRFLPEEDSVLLSCAKKFGLVFSKIKKVIPGRSADQLRARYQVLTKKISAVWTVSEDKKLLQLMAGQGENLNYAALCPFFPDKDRANIRTRYGTLIKWLFKNPNVDIAFAPRRAARRLCHGQAEHSIRKALTKLESRMQNEVKLRMSKSKSKRVTKDSSFEEIEEAVIAFLTTENIQEGESSLLDLLLTTRPDGYTITVDAPLGSSDHCLIRTKVPCAQPITSRPKHLRRMWQYKSADWDGLRQFYASYPWRQLCFISDDPDAPAAAVAETILVGMVYFKPNALVAAGQNKRPWFNRSCKEARLRKQTAYRAWTTARINKDPNVSDMKCKYNAASRSSKRIIARAKFDFISRIGERLTGYPSGSRAFWSLTKAAEGNFCQPSLPPLRNVDGNQAHSAKEKADLLGNLFASNSTLNDIEGDLPPSIPWCGFSMPEINISQRDVRRELLSLDVHKSSGPDGIPAVVLKQCAPVLCPVITRLLALSYHTSQVPSSWKTANVHPVPKKGDRSDPSNYRPIAITSLLSKVMERVMFITRSITLAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -