Sinc038829.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scirpophaga incertulas
Gene Symbol
ct
Assembly
GCA_036419045.1
Location
CM071646.1:3360990-3363803[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-32 6.6e-28 98.0 0.0 4 77 223 297 221 299 0.96
2 2 7.6e-31 1.3e-26 93.9 0.0 3 75 413 486 411 490 0.95

Sequence Information

Coding Sequence
ATGACCAGGCGGGTTGAGGATATGCGACACAGTCGCGACGGATTTCCACCTGTTTTTCCACCTTTTTTCAGCAGCGGCATGCCACCACACATCGAGCGACCTCCGGAAGACATCCGCATGGCGTTAGAAGCTTACCATAGGGAATTGGCGAAGCTACAACCAGGTGGCAACATGCCAAACATGCATAACATGCAGGGGATACCCCCTTTCCCCAACCTCCTTGCGCTTCAGCAGCAAGCCATGCAACAAGCGCAAAACCAACACATGAACGGCTCCGGCTCAGTTCAGGATCTCTCATTACCTAAGGATAAAAATGCCAAATTTAATGGAATGACTGATAGTGATAAGGATAGACCAATGGATGCCGAGGAGGCTATTAGGCATGCGGGTAGCGCATTTTCTTTAGTCAGGCCAAAGCTAGAACCAGGACAGCAATCGACAGGCTCGTCAGCGTCCAGTCCGCTGGGGAATGCCATTCTGCCGCCGGCCATCACGCCCAACGACGACTTCAGCAGCTCGGCGGCGGCAAGCCCGCTGCAGAGGATGGCGTCTATCACCAATAGCCTTATTTCACAGCCAACCAACCCGCCACATCACCCCCCGCCTCAGAGATCCATGAAAGCTGTTCTACCTCCCATAACGCAACAGCAGTTtgacttatttaataatttaaataccgAAGAAATCGTCAGAAGAGTGAAAGAAGCTTTAAGTCAGTACTCGATAAGCCAAAGGCTGTTCGGTGAATCAGTGCTCGGGCTCTCGCAGGGTTCCGTCAGCGACCTGCTGGCGCGGCCGAAGCCGTGGCATATGTTAACTCAAAAAGGGAGGGAACCTTTTATTAGAATGAAAATGTTTCTCGAAGACGACAATGCAGTCCACAAGTTGGTGGCATCACAGTACAAAATTGCACCCGAGAAACTCATGAGGACAGGAAACTATAGCGGAGCGCCTCCATGTCCGCCTAACATGAACAAACCGATGCCGCCGACGCAGAAGATGCTGTCGGAGGCGACGTCGCTGCTGAGCAAGATGCAGCAGGAGCAGCTGCTGGGCGCGGGCGCGCTGTCGCTGGCGCCGGGCCCGCTGCTGCTGCCGTTCGCGGGCGCGCAGCACGCGGCGCACGCGCACCACGCGCACCACGCGCCGCTGCTCGAGCCCAAGGCCGGcaagccgccgccgccgcgcgcgctgCACCACGTGGCGCCCTCCGTCTACGAGATGGCCGCGCTCACGCAGGACCTCGACACGCAGACCATCACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCCGTGCTCGGACTCTCGCAGGGCTCCGTCAGCGAGTTGCTCTCGAAACCGAAACCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCTTTCATTCGCATGCAGCTCTGGCTCAGCGACGTGCACAACATCGACCGGCTACAGGCGCTCAAGAACGAGCGCCGCGAGGCCAACAAGCGACGACGTTCCAGCGGGCCCGGCCAGGACAACTCGTCCGACACGTCGTCCAACGACACCGCCGAATTTTACCACTCGAGCTCACCTGGGCCCGCCGCCGGCGCGCCCTCCGCCAAGAAGCAGCGGGTGCTGTTCTCCGAGGAGCAGAAGGAGGCGCTGCGGCTCGCGTTCGCGCTCGACCCGTACCCTAACATGCCCACGATCGAGTTCCTGGCGGGCGAGCTCGGGCTGTCGACGCGAACGATCACCAACTGGTTCCACAACCACCGCATGCGGCTGAAGCAGCAGGCGCCGCACGCCGGCGAGCCGCCGCCGCGCGAGGCCGCCGCGGCGCCTTTCGACCCGGTGCAGTTCCGGCTGCTGCTCAACCAGCGGCTGCTGGAGCTGCAGAAGGAGCGGCTCGGACTAGCGGGCGTGCCGCTGCCCTACTCGCCGTACTTCGCGGCGGGCGGGCTGGCCGCGCTGGTgggccgccgcctcgccaaggAACCGCCCGCCGGCCTCGACCTGTCCATGCCGCTCAAGCGCGAGCCGGACGCGGACGAGTTCGACGACGACGAGGGCGACGCCGAGGCGGAGGCTGAGGCGGACGCGGACGCGGACGCCGACGCGGACGGGGACGCGGACGCCGACGGGGAGGGCGACGCCGACAGCAACCTAGGCTCCGAGGAGTCGCTGGACGGGGAGGCcaaggcggcggcggcggcgcgctcgCGCTCCAGCCGCCGCAAGCCCGCCGCGCCGCAGTGGGTGGACCCGCACTGGCAGGACGAGGTCATCATCAACGGCGTGTGCGTGATGCGCGCGGACGGGCTGCGGCGCGAGCGCGAGGCCACGGCGCGCGTGGAGCCGGCGGGCCCgggcccggcgccgccgccgccgccgcagccggcgccggcgccgcagccggacgcggcggcggcgcgcggccccggccccggccccgcgcccgcgccggccGCCACCGACGCGCCGGCTGCGGTGAAGGCCGAGGCGGACGCAGACCGGTGGGAGTACTAG
Protein Sequence
MTRRVEDMRHSRDGFPPVFPPFFSSGMPPHIERPPEDIRMALEAYHRELAKLQPGGNMPNMHNMQGIPPFPNLLALQQQAMQQAQNQHMNGSGSVQDLSLPKDKNAKFNGMTDSDKDRPMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSAAASPLQRMASITNSLISQPTNPPHHPPPQRSMKAVLPPITQQQFDLFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMLSEATSLLSKMQQEQLLGAGALSLAPGPLLLPFAGAQHAAHAHHAHHAPLLEPKAGKPPPPRALHHVAPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDVHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTAEFYHSSSPGPAAGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAGELGLSTRTITNWFHNHRMRLKQQAPHAGEPPPREAAAAPFDPVQFRLLLNQRLLELQKERLGLAGVPLPYSPYFAAGGLAALVGRRLAKEPPAGLDLSMPLKREPDADEFDDDEGDAEAEAEADADADADADGDADADGEGDADSNLGSEESLDGEAKAAAAARSRSSRRKPAAPQWVDPHWQDEVIINGVCVMRADGLRREREATARVEPAGPGPAPPPPPQPAPAPQPDAAAARGPGPGPAPAPAATDAPAAVKAEADADRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01331321;
90% Identity
iTF_01333625;
80% Identity
iTF_01333625;