Sinc013770.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- kn
- Assembly
- GCA_036419045.1
- Location
- CM071631.1:8959235-8972318[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-31 2.5e-27 96.9 0.0 11 94 100 173 91 175 0.89
Sequence Information
- Coding Sequence
- ATGATCACCGGAATAGGTCGAATAATTTTGAAGTTGGTAGAGCACATTGTTCGTAGGATTTACCGAACCACTGCGCTGCGGGCGCAGGTCGTGAGCGCGATTCGGTCGGACGAGCTAAACGCGGCGGCGGGCGGGTATACCGGCTCGCCGTGGCCGCCGCTGGAATTAGACCCCGTGGGATGGGGACGAAAACTATATCCTTCGGGGGCGCCGAGGACTTCAGGTGGGCTGATGTTCGGCCTCCACCACCAGGAGGCGGCAGGGGGTCTGCATGCCCAGCCGCGCGGCCCAGTCACCTCCCTAAAAGAAGAACCCTTGACCAGAGCTTGGATGACCCCCACCTCTTTAGTTGATAATACCAATAGCGTGGGCGTGGGCCGCGCACACTTCGAGAAGCAGCCGCCCAGTAACCTGCGCAAGAGCAACTTCTTCCATTTCGTAGTAGCGCTGTACGATAGAGCGGGACAGCCTGTAGAGATTGAACGGACTGCGTTCATCGGCTTCATTGAGAAAGATCAAGTAAGTTAG
- Protein Sequence
- MITGIGRIILKLVEHIVRRIYRTTALRAQVVSAIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRTSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875941; iTF_00325159;
- 90% Identity
- iTF_00325159;
- 80% Identity
- -