Basic Information

Insect: Scirpophaga incertulas
Gene Symbol: -
Assembly: GCA_036419045.1
Location: CM071629.1:35061100-35067671[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.048 2.5e+02 3.6 0.1 51 87 101 138 86 138 0.73

2 6 0.038 1.9e+02 3.9 0.0 27 86 176 263 148 266 0.59

3 6 0.0012 6.2 8.7 0.1 24 85 553 612 544 614 0.77

4 6 0.0022 11 7.9 0.1 34 83 663 711 628 713 0.71

5 6 0.00088 4.4 9.2 0.4 32 77 812 857 789 864 0.76

6 6 3 1.5e+04 -2.1 0.0 52 84 1036 1067 1031 1069 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.048	2.5e+02	3.6	0.1	51	87	101	138	86	138	0.73
2	6	0.038	1.9e+02	3.9	0.0	27	86	176	263	148	266	0.59
3	6	0.0012	6.2	8.7	0.1	24	85	553	612	544	614	0.77
4	6	0.0022	11	7.9	0.1	34	83	663	711	628	713	0.71
5	6	0.00088	4.4	9.2	0.4	32	77	812	857	789	864	0.76
6	6	3	1.5e+04	-2.1	0.0	52	84	1036	1067	1031	1069	0.72

Sequence Information

Coding Sequence: ATGGAGCAAATTATTGTCAAAACTGAAGTTCAACCAAATGGCGAGATTCTGCTGTTTTATGTTGATGGTGAAGCAGGCGAGGATGGTGAGAATCATGTACTTCAATTAAGTGAAGTGGCTGATTTTGAAATTTTGGAGAGAACTGATGATGGCGACGTGATAAATAATGAAAGTGTAGTATATGAAATAGAAGATGAAAATAGCAATCAACCACAACAGTATGAGTGGACAGATGAGGAAGTTCgaaagtttttgattttctataTTGATACGAAAAAAGCATTTAATCAGAGCAATGGTAGAAAACATATGTGGGCAGTGGCATGTAGTACTATACTCCCTAATAAAAGCATTCAGTGTTGTGAGACAAAACTACAAAACTTGAAAAAGAATTACGCTAAATATCTTTTGGAACAGAAAGAGGGATATAACTATGAGTGGAACATGTTTAATGATTGTCATCAGGCATTTCATGATGATGaagatattataacatttttaaaagaaaataatatagagATTGTGGAAGAAAAGAAAATTCCTATCCCACAACTCGTTCAAGAGTCAAATTCCACAGGTACAATTGTAGTGGAACAAGTCAATAACCCTGCCGATGAAAAAGTGGAAACAATGCTTAAACTATACTTGagatataaaacaaacatactAAAAGGATCAACTCCAAAAAGTCTTTGGGAAACAATAGCTATGGAACTGGGTGAAGAGGGATCTGATTATTGGCATAAACGCTTCCTAAATTTTAAACAGCACTACATACGAATGTTGATGAAGAGAGAGACAGATGGTCCTAAAAGCGTTAATTGGCGTTACATGGATTTGTTTGATCAAATATTTGGTGATGATCCTGGGTTCCAGAAAAAATATGCCAGCAATAAGGAAACTATTTCACAAGAATCAAACGAAAATAGTATTGCTGATAATCATGAATGGAATGACACTGAGTGTACTATTTTagccaaatattattttgattgtttcGATGAATTTCAGGATCCAACTATACCTGACCATTTCTTATGGACTGAAGTGGGGCGTCTGTTGGATAAGAAGCCAGATATTTGTAAGGACtattataatgaaatgaaaagtAACCATCTAGATAAGTACTCCACGGGTGCTTACAGTTTGACATCACGTATTCCCGTAGAgataatatttgataatattatagcAAAAGAGGTTGATTTATATATTAGCAGTTCTAAatatgtagaaataaaaaaatggacAAAAGACGACATAGAAAAGATGGTGTactattttgatgaaaatatacAATTGTTTAAAGATTcagtttgttattttgtttgctGGGCTTATGTTAGCAAATTggttaataaagatttattggCATGCAAGAAGCAATGGGAAGAATTAAAAGTGATTTACAAGAcaatattgaatgataaaaagaaaaatcctGAAATGTCCATTAACTGGGTCTATATTGATATTTTCGACAGGATTTTTGACTTTGGTACCGACACCAAGCTTTTGTATGGTtatgaaaaacttaaaaatagtgATTCTAATAACACGGCCAAAGTCGCAGTCAAAGTTAATGTCAAAGAGGATGATATTGTGATTAATAATGGACCAGATGATGATGATTCAGATGAAAGCAGCATAACAAAACCGTATGGTGATAAAAAAGTTTTCAAATTActagatttttacaataaacataAGGAGGCATTTACTAAAGCGCGGAATAGCAAGTCAATGTGGAGCGGCTTATCGAAAAAAATAGGTCTGACAAATGAACAGTGTGCTCATAGACTTAGGAACTTAAAGCAGGTGTACACTAGTTATGTAGAAAGAGAAATGAATAGACCAGATGTACCAATTTTGTGGCCATATTACGATAGATGTAAAAAAGTGTTTGGCCTGAGAGCTACTAAATTCAAactgttgaaaaaaaaagagcCTTCACATGAAGCTAAAGAGTGGACCACGACACACATTTTACAGTTGCTGAGTTTGGTGAAGAACAACATTGAGAAGCTATCCAAAAAGAATGACAACTTATGGAGTGATATCGCCCAGATGTTAGGTAAATCAGAGCCGGCTGTTCGTGCCAAATTTCTTGAGCTACGTAAATCTTATAGGAGATTGAAGACTTTGAAAGAAAAGAATCCAAAGTATAATTTAAGATGGCGCTACTTAAATCAGTTTGAGAAAATTTATGGAGGGTCAAATGCCTCGATGCTCAATGATGAGGTAGAGATGAACGGCTCTTTCGATGAAGCTCCTAAAGAAAATATCGAAGAAGAAGAAGATTATCAATGCATAATAGTAATACCAGATGGAGACGCAAGTGAATTGAGTGATTCTCAAATAGTGCACGGGACCAAAGAGTTCAATTCTGGAACACAGCAGAAACTTACAAGATGGAACAAGGTGAGTAAGAAAAATCTACTCATATTGTACAAAAATTACATCAAGGCAAGGAAAGGACAAGAGATAAACACTAAACAGATGTGGCAGGAAATAGCTGCAAAAATGTCTACGAAGAGACCACATACATGCCGGAAAATGTTTGTCAAACTCAAAGCGAACCACATGAAGTTGAAAAGAAATGGCGGTGACATAAGAGAGTCTCCATACTTCGCGCTgatggaaaaaatattatctcaaaaattgtcatttacaaagaaatcaCAAACCGACCTTGACGAGAATAAACAATTTGAGGATGTGTCGCTTCCCACTGAAAAAGTGGAGCTAGCTTTGCAATACTATCTTCAAAATATAGAGGACTTTTTGAGTCCGAAATTTGAGAAGAAATACTTGTGGACAGAGCTTTCAGACTTTGTGTCACTGCCAATGTGGAAGCTTTTTAACAAAATCaattatttgaaacaaaattaCTCTTTGGAAACAGGCACGGTGGCGGGACAGAACACGCTTTTCAACGAGTTTTTAAGAGAAATTGTTCTTAAAGAGAATGCTATGAAAGCTGAGATTTCAGAACCAATGAATGTAGATGAGAATGATGTCACGTGGACAGAAGATGAAGTAGAAAAGTTACTGGTATGGTATTTGGCTAACCTGGAAAAGTTTAAAAACCCCAAGTTTGCTCGGAAATATCTTTGGCTGGAGGTATCTTCTACTTTAAGGAAGACTCCAATGGCTTGCTCCAGGAAAATGGCTGAAATCCGGTCTCAGTACAAGACTTTGATTAAGGGATCTCCCGAAGACTTGCTTAGTTGGCGATTTAATGAATTGTGTCAAAAAATATACGGTACTGGCAAGAAGAACGATAGTAGCGTAGCACAGCTGCTAATGGATTTAACagaataa
Protein Sequence: MEQIIVKTEVQPNGEILLFYVDGEAGEDGENHVLQLSEVADFEILERTDDGDVINNESVVYEIEDENSNQPQQYEWTDEEVRKFLIFYIDTKKAFNQSNGRKHMWAVACSTILPNKSIQCCETKLQNLKKNYAKYLLEQKEGYNYEWNMFNDCHQAFHDDEDIITFLKENNIEIVEEKKIPIPQLVQESNSTGTIVVEQVNNPADEKVETMLKLYLRYKTNILKGSTPKSLWETIAMELGEEGSDYWHKRFLNFKQHYIRMLMKRETDGPKSVNWRYMDLFDQIFGDDPGFQKKYASNKETISQESNENSIADNHEWNDTECTILAKYYFDCFDEFQDPTIPDHFLWTEVGRLLDKKPDICKDYYNEMKSNHLDKYSTGAYSLTSRIPVEIIFDNIIAKEVDLYISSSKYVEIKKWTKDDIEKMVYYFDENIQLFKDSVCYFVCWAYVSKLVNKDLLACKKQWEELKVIYKTILNDKKKNPEMSINWVYIDIFDRIFDFGTDTKLLYGYEKLKNSDSNNTAKVAVKVNVKEDDIVINNGPDDDDSDESSITKPYGDKKVFKLLDFYNKHKEAFTKARNSKSMWSGLSKKIGLTNEQCAHRLRNLKQVYTSYVEREMNRPDVPILWPYYDRCKKVFGLRATKFKLLKKKEPSHEAKEWTTTHILQLLSLVKNNIEKLSKKNDNLWSDIAQMLGKSEPAVRAKFLELRKSYRRLKTLKEKNPKYNLRWRYLNQFEKIYGGSNASMLNDEVEMNGSFDEAPKENIEEEEDYQCIIVIPDGDASELSDSQIVHGTKEFNSGTQQKLTRWNKVSKKNLLILYKNYIKARKGQEINTKQMWQEIAAKMSTKRPHTCRKMFVKLKANHMKLKRNGGDIRESPYFALMEKILSQKLSFTKKSQTDLDENKQFEDVSLPTEKVELALQYYLQNIEDFLSPKFEKKYLWTELSDFVSLPMWKLFNKINYLKQNYSLETGTVAGQNTLFNEFLREIVLKENAMKAEISEPMNVDENDVTWTEDEVEKLLVWYLANLEKFKNPKFARKYLWLEVSSTLRKTPMACSRKMAEIRSQYKTLIKGSPEDLLSWRFNELCQKIYGTGKKNDSSVAQLLMDLTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -