Sinc023572.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- arid5b
- Assembly
- GCA_036419045.1
- Location
- CM071636.1:1868385-1886987[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-10 7.1e-07 31.0 0.0 3 61 342 393 340 405 0.86
Sequence Information
- Coding Sequence
- ATGGCATGCGACGCCACGCCAGAAATCGGTTTTACGTGCGGCTATAGATGTTTCACATCAAAACATAGTGACGAAGTACTGGCCATAAACGACAAGGTGGTCGTGCGCGCGGAGGACCTGTTGAGCTGGGCGTGCGACGGTGCAGGCTGGCGATGGGGGCTGCGTGCCGTGTGGCGCGGGgcctgcgcgccgccgccgcccgccgacgCCACGCAGCCGCTACACCACACCAAACTGGACTTCAGCGACGTGGACAGGGAGAAGTGTGCTCTAGGTAAGTGGCACACGGCGCAGATTGTCGCGGAGCCTGTGCGTCGACGCCACGCAGCCGCTACACCACACCAAACTGGACTTCAGCGACGTGGACAGGGAGAAGTGTGCTCTAGATTGCCGCGGAGCCTGTGCGTCGACGCCACGCAGCCGCTGCACCACACCAAGCTGGACTTCAGCGACGTGGACAGGGAGAAGTGTGCTCTAGATTGCCGCGTAGCCTGTGCGTCGACGCCGCCTGGCGACGCCACGCAGCCGCTGCACCACACCAAGCTGGACTTCAGCGACGTGGACAGGGAGAAGTGTGCTCTAGTTGACACGGAGAGCCCTGGTGTAGTGGTGTTCTCCTATCCGCGGTACTGCCGCTACCGCGCGCTGCTGGCGCGATTAGAGGGGATCCAGGCGGACTGGTTACGGGATTCCTTGGTGGCGGCTTTAGGAGGTTACGCGGCGCCTACTACCAACACCAGGATACTGTACTGCAGGGATACGTTTGAATACCCGGAACTCGAAGGCCATGAGTTCGTATGTAACGAGCTCGCCCCCAAACTGAAAGGAAGGCCTCGGGGAAGACGTCGCAGAGCTTCTCCTGGCGCGTCCGACGGGGAGAACGCGTCCGGACCTGAATCCGGATCGGAGACCACGCTGACCGCCGATGTTCCACAAACCCCGCGAAGACTGTCTCTCCGCAACGGTGGAGAGAGAGCCGACATCTCCTCGTCCCCCCAAGACGCGGAGAGCAGGAGAGAGGACAAGGCGTTCCTGGCACAACTGAAGCAATTCCACAGGGATGGCCAGATTTGTCCGCCTAACGATTTGTCGCTGCGTTCGTTGTACTGCAAGGTGCAGTCTCTGGGCGGGTACGAGGCGGTGAGTCGTCGTCGCCGCTGGCGGGAGTTGGGCGCGCAACCCGCGCGCTGTCGCCGGCACTACGAGAGGGCTCGGTGTGAAGTCCGCTGGTGCGTCCTGCCGCAGGTATCTGCTGCCGTACGAGCGGCACGCGGCGCGCCGCCCGGCGCCGCGCCGGCCCGCCACCGCGCCCGCCTCCGCGCCCGCGTCCGCGTCCGCTCCCGCTCCGCGCACGCGCACGCTCTCGCGCCCGTGCCACTGCTGCGCTCGCCGGTGCACGATCTGACCGAGACGGAGCCAACGGATTCAAAAGACGACATGAATTACGTCTCGAAACCGGCCGAGGAACTGAACCGGGAGTTCTTAGAGTCACTGCCGAAGGAAGAGGAGAAACCGGACAAATCCGAGAAACCGGTGAAGTCTGACAAGCCGGTGAAACTTTCACCGGAGAAACCGGTGAAGTTGTCTCCGGAGAAACCGGCCAAGATATCCGTGAAGCCCGTGGAGGAACTTGTGGAGCCAAAAAAACTGCTGGAAGACGAGTTTTCGCAACTGGCCAAGGTGGAGCCGCTTGTGAATCACAAACTCAGTACCgACAACCCGGTGGCGGTGGGCGCGGCCCCGCTCGGCTGCCTCTCCTCGCTGTCGGCGCTCGGCGACAAGTACGTCAACGGGCACGACGCTCAGGTACGTGGGCCTGCGCTACGCTCAGGTGTGTCGGTGTTACGCTGA
- Protein Sequence
- MACDATPEIGFTCGYRCFTSKHSDEVLAINDKVVVRAEDLLSWACDGAGWRWGLRAVWRGACAPPPPADATQPLHHTKLDFSDVDREKCALGKWHTAQIVAEPVRRRHAAATPHQTGLQRRGQGEVCSRLPRSLCVDATQPLHHTKLDFSDVDREKCALDCRVACASTPPGDATQPLHHTKLDFSDVDREKCALVDTESPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTTNTRILYCRDTFEYPELEGHEFVCNELAPKLKGRPRGRRRRASPGASDGENASGPESGSETTLTADVPQTPRRLSLRNGGERADISSSPQDAESRREDKAFLAQLKQFHRDGQICPPNDLSLRSLYCKVQSLGGYEAVSRRRRWRELGAQPARCRRHYERARCEVRWCVLPQVSAAVRAARGAPPGAAPARHRARLRARVRVRSRSAHAHALAPVPLLRSPVHDLTETEPTDSKDDMNYVSKPAEELNREFLESLPKEEEKPDKSEKPVKSDKPVKLSPEKPVKLSPEKPAKISVKPVEELVEPKKLLEDEFSQLAKVEPLVNHKLSTDNPVAVGAAPLGCLSSLSALGDKYVNGHDAQVRGPALRSGVSVLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -