Sinc035088.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scirpophaga incertulas
Gene Symbol
Arid4b
Assembly
GCA_036419045.1
Location
CM071643.1:9764118-9783406[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.2e-30 4.2e-26 92.6 0.1 1 89 283 369 283 369 0.96

Sequence Information

Coding Sequence
atgGCAGATGATCCTCCTTTTTTGTCAGTTGGCACTGATGTAAGTGCCAAGTACAAAGGGGCTTTTTGCGaagctaaaattaaaaaagttgtacGAAATATCAAATGTAAGgtaACCTTAAAAACAGGTGGTGGGACCATCACAGTCAATGATGATATGATCAAAGGCATCCTCAGAGTAGGTAGCACTATAGAGGTAAAGCAAGATCCAAAAAAAGATGCTATGGAGGCTgtcattacaaaaatacaagacTGCAGTCAATATACTGTTGTGTTTGACGATGGCGATATCACAACTTTGAGGCGGTCAGCATTATGTCTAAAGAGTGGGAGACATTTTAATGAGAGTGAAACTTTGGATCAGCTACCTCTGACACACCCAGAACACTTCTCAACTCCTGTTATAGCAGGAAGACGAGGTCGAAGAGGACGAGTCCAGTCTGATGAAAGTGAAGGTGAGGGTCCTAGCACACGTCGCATGAAGGAAAATAGTGCAGAGAGGGAACCCAACGTGGGCAGAGTTGTCTTGGTTGAAGCAGCAGGTGGTGCTGAGAGACGACGTCCGCACCAGCCTGCCTTCCCTGCACTCGTGGTAGCCCCCACGGCTCAGATCAAAGTCAAGGAAGACTACCTAGTACGCTCCTTCAAAGATGGAAGATaTTACACGGTCCCAAAGAAAGAAGCGCGCGAGTTTCGCAAAGGAAGTGCACCTTCTGAGTGGGCTGGAGTAGACGCAGCGAATCAATATCTTAACAATGGAGTGCTGCCGCCTCACTGGGATCGTGACACACTTTTCAACGAGCCCCGGAACACATCTGATGATaGCTCCGATGATGAACCCCGCGAGGAGAAAGATCATTTCGTGGCACAGCTATACAAGTTTATGGACGATCGCGGCACGCCGTTGAATAGAAACCCAACTATCGCCAACAGAGACATTGATTTGTATAGATTGTTTAGgGTGGTTCATAAGCTTGGTGGCTACAACAGAGTGACCAATCAAAATCAGTGGAAGACAATAGCAGACAAAATGGGTTTCCATCCTGTAACTActagcataacaaacttatgtAAGCAGGCATATAAAAAGTTCCTGCACAGCTTCGAAGACTTTTACCGCAAGCTAGGTGTGACTCTAGTAGCGCACCCCCGTGGCGCAAGGACTCCACCGGCCGGGAGGTCGCTGATACGAGACCGTGACCGCCAACCGCCCACTTCCTCGTCGGCATCTTCCACTCCCACCGGCACACCCACTCAGCGTAAAGATAAGGACTCTGATAAAAGTGAGACAGAAAAGAGCGAGAAAAGTGAAAAGGACGATAAAGTAGAAAAGCCTGAGAAGAGTAAGGAAAAACCACGCGTCAGCGACAACGAAGACAGCGGAGACAACCAACCTTTAGTGACGGTGTTACCCAAGCTTGAAAAACAAAAGGATAAAGAGAAGGAAAAGGACAAGGaaaaagataaagaaaaagAGAAAGAAAAAGACAAAGAAAAGGATAAAGAAAAAGATAAGGAGAAGgagaaagaaaaagataaagagAAGGAGAAAGAAAAAGATAAGGAAAAGGTTAAAGAAAAAGACAAGGAAAAAGTGAAAGAAAAAGATAAGGAAAAgataaaagaaaaagataaggTAATGGAGAAAGAAAAGGAAAAAGAGAAAGATAAAGAAAaggaaaaggaaaaagaaaaggaGAAGGAAAaagataaagaaattaaaaaagaaaagggtCCTGGTCCTAGTGTATTAGATGATAAAAGCGTGTCTAAGCGTCGTTCGCAGTCGAAGACGCGTAGCGTTCTGCCTGTCAAGATGGAGTCACGGGATAAAAGGACACCGAAGAGGAGACCATTGTCTTCAAAAAGTGAGAGTGCAATGGCGAGCACATCCCGCGCGTCACGTCGGCCACACGCCTCCACTGACAGCGATAGCTCTGGCCGAGCCTCAAgatgCGGTCTTACGAAAAAGATGCCCAGCCGCCGTAGTCAAAGCGCTAATTCAGCTAGCAGCGGCAACACCATCGCATCTAATAGTAGCAAACGGCCGCGGAAAAGGAAAAGCACCGAGCCATCGTCCAATGAACCACCACGTTCTGGGGGAGCCAACGTGAAAGCGCAAGTTGGCGATAAACTGAAGGTTTATTATGGTCCTACGCAGTCTGAGTCAAAGGTGACGTATGAAGCGAAAGTGATTGAGATATCGGCGGAGGGCCTACTTCGCGTTCACTATACAGGATGGAACAATCGATATGATGAGTGGATAAAACCGCAACGAATTGCCCTCAACGTTACGCAACATGAGGCTCGCAATAAAAAGAATTCAAGCTGCAGTAGGCGTGTCAGAGCAAAAAGGACGGAAGaatCTTCAGCTCGATCGGATTCTGATAGTGATTCAGATAGTGATGATGATATCAAGAGACCACCAAAAAAGCCTGACGAGAAAAGTAAAAGCACAAcACCATCAAGATCGAAGGACGCAAAATCAAGCGATAGCAGCAGTTCTAGCAAACCACGAAAGAGACCAATTAGAAACATTTCAACGCCAACAAATGTCTCGCCACCTAAAAAACTGCGACCTACTTCTGCTAATAGCCATCAGGGCCGTGACTATGACCTTAACGAAATAAGGTCAGAACTTAAAGGATTGAATACTGTCAAGCAAGAGGCTGAGGAATCAAAACCTGATACAGACAAAGATACTGCACCCCCTGCTCAAGTAGTTGCACCCCCGCCTGAACCTCCTCAACCAGAGAAGCAACCTGAGGATGTTTATGAGTTCAAAGAACCGGAACCTTTCGAATTAGAATTGCACGATGAAAAAAAGAAACGAACACATCGCATTTTTGATGATATTTCCCCAAGCAAGTATACATCTACATTATCCAAGTCATTGAGTGAAGAAATATCAGAAGATCCGATCAGATTGAGGCCATCAACTCTCAGGTCCCCATCTCTGTCACCATTCCGCGAATTTGTTGCATCTCGTGATATGCCGGAACAAAACAGTGCAGAAGAGGACTCGAAGGATGGATTATTTTCACTGGACGATGACTCGTTCCCAGGAGAGGGCAGCTCGGGACCTATTTTTGAAGGATTCACGCCAGCTAAAAATCAAGAAACATACTCTAAGAAAAATAAGGTTACAAAATTAAGAGAATTAATAGATGACTCACCAGATAGTCCCGCTGATGATGAACAGTCTTCCGAGGATGAATCTGAGGAGACACCTACAAAAGAAGATGATGAAGAAGACAGAGGAGCCAGTCCAGCTCCTGAAAATGTTATTatggttaataaaataatagaccaAGAAATTAAAATGGAGACTACAGATCCACCTGCAGTAGAAACTGTAATAGAACAGATAGAAGTTCCCAAAGAAGATAACGAAGATAGCGATGACAAGCCAATTGCTAAATTGGAAGAGGAAATAAAAGAACCTGAATTAAAAACACCACCCAAGTCACCGCCGCTGAAGAAAATAGATCCGCCGGTTATCTGTACCGTTTCGACATCAAACCTTGATTTCAACAATGAAAAAGAagatgaatttaaaaatgtaagcaCAGTTGATATCGTCACACCGAAAGTTCTTTGCATCCCACTTAATCCAATAGAACCCAAGGAAAATATCCTTAATACAAATAACGAAAAAGTGGAGCCGAAACAATTTGATCCGGAATCAATTTTGACCTCAAAACTAGATCTACCTTCCAGTCCACTTATTGACACCGAGGAAGACAAATCAGAACCAGATAGTCCAGCTAGAATGGATGTTCTACCTGAACCTCCTCCGGGTTTCTTGCTACAGTCTGAAGGACCAAAAATAGCCGAAAAGCTTTTGAAGGCTATAAGTAGTGCTAAGAGGCTTTCAATGTCTCCACCTCCTGATGAGCCTCCAGCCAAAAAAGAAAACCATCCTATTACACCTAAAAAGgatgttgtaaaaataataaaacccgAAGATAAAGTGTCACCTGTGGCTCcagaacttaaattaaataaaatagagccTGCAAAAGTTTTGCCTAAAGCAACAGAACCCATGAAAAAGTTTGGATTATCTGATCTCGGTGACTCTATATTTGGTGAGCCGTCGAACCTTTTGGATAGTAAACGTGACTTAGTGTTTGTAAAGAAAGTGAAGCCTAAAGAGGCATCGCCTCCTAGACTGCTAAGTCCGTTAAATATCTTAGAACGAAGAAAAAGTGTCTGCGATTTGCCTTTGAGTAATCCAGGGAAAAATAATAAGGTACTGAGTGACACAATACAAAGGTTATCGTCGCAGATCAATCAGTCAGCGGCGACGGTGGCCGCGAGCTTACCGCTGCCCCCATTCCCACACGAAGATAGGAGTGATTCCAGCGACTCCGACGATTCTGATAGAAGGTTGATAATAGACAAGCTATCGATCGAGGAATGGGGCAGTGGTAGTTCAGAGACGTCGCGTGGCCCCGCAGGAGCGCTGGGCGGCGCCGGCGCGCGCTCGCTGCACGCCGGCAAGTCGCCCGGCGAGTGGAGCGCGGGCGAGTCGCTGCTCATGCTAGAAGATGCCTGCAAGAACGAAAGAAAACACAGTGAGTTAGCTCAGAATACTCTGTttaacagattttttgaaaCGATGACCAATCTCGAAATCAAAGACAAGTCATTTTTGCTGTGA
Protein Sequence
MADDPPFLSVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKTGGGTITVNDDMIKGILRVGSTIEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRVQSDESEGEGPSTRRMKENSAEREPNVGRVVLVEAAGGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPSEWAGVDAANQYLNNGVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVHKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRQPPTSSSASSTPTGTPTQRKDKDSDKSETEKSEKSEKDDKVEKPEKSKEKPRVSDNEDSGDNQPLVTVLPKLEKQKDKEKEKDKEKDKEKEKEKDKEKDKEKDKEKEKEKDKEKEKEKDKEKVKEKDKEKVKEKDKEKIKEKDKVMEKEKEKEKDKEKEKEKEKEKEKDKEIKKEKGPGPSVLDDKSVSKRRSQSKTRSVLPVKMESRDKRTPKRRPLSSKSESAMASTSRASRRPHASTDSDSSGRASRCGLTKKMPSRRSQSANSASSGNTIASNSSKRPRKRKSTEPSSNEPPRSGGANVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISAEGLLRVHYTGWNNRYDEWIKPQRIALNVTQHEARNKKNSSCSRRVRAKRTEESSARSDSDSDSDSDDDIKRPPKKPDEKSKSTTPSRSKDAKSSDSSSSSKPRKRPIRNISTPTNVSPPKKLRPTSANSHQGRDYDLNEIRSELKGLNTVKQEAEESKPDTDKDTAPPAQVVAPPPEPPQPEKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPIRLRPSTLRSPSLSPFREFVASRDMPEQNSAEEDSKDGLFSLDDDSFPGEGSSGPIFEGFTPAKNQETYSKKNKVTKLRELIDDSPDSPADDEQSSEDESEETPTKEDDEEDRGASPAPENVIMVNKIIDQEIKMETTDPPAVETVIEQIEVPKEDNEDSDDKPIAKLEEEIKEPELKTPPKSPPLKKIDPPVICTVSTSNLDFNNEKEDEFKNVSTVDIVTPKVLCIPLNPIEPKENILNTNNEKVEPKQFDPESILTSKLDLPSSPLIDTEEDKSEPDSPARMDVLPEPPPGFLLQSEGPKIAEKLLKAISSAKRLSMSPPPDEPPAKKENHPITPKKDVVKIIKPEDKVSPVAPELKLNKIEPAKVLPKATEPMKKFGLSDLGDSIFGEPSNLLDSKRDLVFVKKVKPKEASPPRLLSPLNILERRKSVCDLPLSNPGKNNKVLSDTIQRLSSQINQSAATVAASLPLPPFPHEDRSDSSDSDDSDRRLIIDKLSIEEWGSGSSETSRGPAGALGGAGARSLHAGKSPGEWSAGESLLMLEDACKNERKHSELAQNTLFNRFFETMTNLEIKDKSFLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-