Scos001693.1
Basic Information
- Insect
- Schrankia costaestrigalis
- Gene Symbol
- GATA-B
- Assembly
- GCA_905475405.1
- Location
- FR997826.1:199539-202440[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 1.8e-14 54.3 3.9 1 34 11 43 11 45 0.97 2 2 5.2e-19 3.4e-15 56.6 6.8 1 34 80 112 80 113 0.98
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCGATCCACACGCCGTTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCACACGCCGCTCGCGCTCGCCGCTCACCACCACGACATGGGCACCAAGCGGCCCGGCATGGCGTGCACGAACTGCCAGACGACCACCACGTCGCTGTGGCGGCGCAACGCGCACGGAGAGACCGTCTGCAACGCCTGCGGACTCTACTACAAGCTGCACAAGATAGACAGACCACTTGCTATGAAGAAAGATTCTATACAGACGCGGAAGCGGAAACCCAAGAACAGTATAAAGGCAGAGCGAAGCCTCAAGACTGCAGTACAGCGCACCATGACCTCCGCCGTTAAGATAGAGAACTTGTTGGAGAGCGGCGCGCGCTCCCCGCTGGCGCTCAACTACTACGTGCAGCACGCGCCGCACGCGCTCAAGCTAGAGGAGCCGCCGCCCGCGCACGCGCACGCGCACGCGCAACAACACGCGCACGCCTACGACGACGCGGACTACCGCCGCCAGGACCTGCACCCCGACAGACCCACCGTCGTCTCCATGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHTPLALAAHHHDMGTKRPGMACTNCQTTTTSLWRRNAHGETVCNACGLYYKLHKIDRPLAMKKDSIQTRKRKPKNSIKAERSLKTAVQRTMTSAVKIENLLESGARSPLALNYYVQHAPHALKLEEPPPAHAHAHAQQHAHAYDDADYRRQDLHPDRPTVVSMGS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281937;
- 90% Identity
- -
- 80% Identity
- -