Scos032822.1
Basic Information
- Insect
- Schrankia costaestrigalis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905475405.1
- Location
- FR997847.1:8306292-8308715[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-09 8e-06 27.2 0.1 2 45 276 321 275 322 0.94 2 4 1.5e-07 0.00037 21.8 0.2 2 46 329 377 328 377 0.95 3 4 1.5e-09 3.7e-06 28.2 0.0 1 43 381 423 381 425 0.97 4 4 0.0026 6.3 8.3 0.0 4 46 434 477 433 477 0.76
Sequence Information
- Coding Sequence
- atGGATTACGATGATTGGGCTGGTATGGATACTGAAATGGATTGCGGACCAGAAACTGACtcagatgatgatgaagatgaaaTTAGACAACTTGATGCTGCACTGGAGGAGGCAGATATCGAATTGTGTGATGATTCCGTAGATGAAGATTGGACGAACTGTCCTAGCACCTCTCAAACTGAGAGCTCATCTCACAGTGTTGCACAAAGTAGTATACTTTCTCCAACACAAGAACTATCCAAAATTGATGCTACTTTAGCTATAAACAAACTTTACGATGAAAAAATTAGACGACTGGAAAGAATTTTAACGACACGTTTAAGTGAATGCCGTAATAAACTTATCGAAATTCAACAAGACGGTGTACCTGAGAAACAAGAAGTATTCCGTTATATAAACTGCGGCAGACCTTATTTTAGAGACCGCAGTAACTTCCCTGCGCCAGAAAACGAAGATGCTATTATGGCTAAAAATCAGATGTATGACTTTTCACTAGTTACATCAGTACCTGGTTGGACAGTAAGAGATAAAAATCAATTTACCCAAGTAATGACTCGTATTTCTCTGGATCTGAGAAAGGAAGAATATACCAAAAAAATCAAAGAGCTCATGTATTTACCTGATAAACAGAaggtaaaaaaagaaattgccGCACTAACAAAGGCAAAAGATGCTTTAAGTCTTAAAATGCCATTCATAGAATTAGCCCTACCATTAGATTACGAATATGACTGGGAACTACTGTCTTACAAATTAAACAGAAGACATACACCACATGAGTATCAATGCCTCTGGAAACTATACTTTCATCCATCTATTAACAAAAGTACATGGAAAAGCACAGAGCATAATATGTTACAGTCCCTTGCCTCTGCCCATCGTTATCAAGATTGGGATAAGATAGCTAAAGATCTTAACACGGGTAGAACTGGATATCAATGCTTTGTTTATTACAGAACTAACATGACTAGTGGCTGTATCGGTAAGAAATGGACACATGAAGAAATAACCTATCTAAGAAGACTAATAGAATACTTTAGAGAAGATTATTACATTCCATGGGGTAAAATAGCTGCAGCGATGGAGAACAGAACTAAAATTCAaatctacaataaatatatgCGCCTTCTTGAACACAGAAAAGGCAGATTCCTTCCTGAAGAAGATGCTGTTATACTTAATTGTGTTAAAAGATTTGGCCCTAATTTCCACAGAATAACTCAATACCTTGCTCACAGATCTAGAATACAAATACGAGCCCGATATCAAGTTTTAAGTAAAATGAGAGTTTCAATTGTATGGTCAATAGAAGACGATAGAAAACTTATTCAAATTATGACCAACCAGGATTCTATGACTTTTGCTATGGCTACTAAATTTTTCCCTGGACGTACTAGAACTAATATTAGAACAAGGTATTTGACTTTATTAAGATGGATTAAAAGACACCCTAATAAGGATATAAAGTTTGCACCTAGACGTGGCGCACGGAGATTGAACCATGGCCAAGCCTGTGAAGATCTAACTAAAGCCATTGAAGATTTGAAAAACTCTTTAAAAACAGAAGTCAGTTCAAAAACGGAAAGTAAAAAGATTACTAAAGATTCAAACGAGTGTGATATAGAAGATGCTATTGTCGCTGTTCTTGTTAATGAAGCAGTCAAAGAGAGGGAAATGAAACTTTGTACAATTGATAATGATATAACTCTGCCAAATGAAATAGTTGtgtcacacaaagatttaaacTTAACAAATTTACATAAATGTCTCATATTTTTAGGTGCAAATCTAAACAAAGATCTTTATGATAAATCTCACTTTAAAGATGACTATCCTAGGTTAGGTGACAACAGTCAGGATGTTAGTCTTTTTAAGGTGAAGTCTTAttctaagaaaaataaaataaaaactattcaaATGACTGATGTCCCTAGCATATGGGGTGACAGTTCTTTAGGTCACCGTAACTATGTTCTACCGCCTCATTACGCAACAATTACTGGTTGTAAAGCTATAATGTCACATGTAACATCcctatctatgtataatagttCTGTGAATTTACATGTCCTTGTAAGACGAAATCCTATATTAAAGGAGCATATGGACCAGCTTCTAGAATGTTTTTACTCATTGTTCTTATGGCCACTTTTGCTTTCAAATGAAGGTCCAATAGAAATTCGTGAGGCACATTTACGTAAAAAAGATTCAGCTTTTCTAAGGCCGCCTGCATTGCCTGTTGCACCAGAAGTAACTATAAACTTTGATAAATATAGAAAATACCAAGCAAATGGTGAAGAGGATATAGATTTAAATGAGAAGACAAGTAGAAAGAAGGTCATAACTATTGAGGAACCTGAGGGCTGTTCATCTAAGAGTTCATCTAGTTTACTTAATAGTAAGGCAGATGAAATATTTGAGTAA
- Protein Sequence
- MDYDDWAGMDTEMDCGPETDSDDDEDEIRQLDAALEEADIELCDDSVDEDWTNCPSTSQTESSSHSVAQSSILSPTQELSKIDATLAINKLYDEKIRRLERILTTRLSECRNKLIEIQQDGVPEKQEVFRYINCGRPYFRDRSNFPAPENEDAIMAKNQMYDFSLVTSVPGWTVRDKNQFTQVMTRISLDLRKEEYTKKIKELMYLPDKQKVKKEIAALTKAKDALSLKMPFIELALPLDYEYDWELLSYKLNRRHTPHEYQCLWKLYFHPSINKSTWKSTEHNMLQSLASAHRYQDWDKIAKDLNTGRTGYQCFVYYRTNMTSGCIGKKWTHEEITYLRRLIEYFREDYYIPWGKIAAAMENRTKIQIYNKYMRLLEHRKGRFLPEEDAVILNCVKRFGPNFHRITQYLAHRSRIQIRARYQVLSKMRVSIVWSIEDDRKLIQIMTNQDSMTFAMATKFFPGRTRTNIRTRYLTLLRWIKRHPNKDIKFAPRRGARRLNHGQACEDLTKAIEDLKNSLKTEVSSKTESKKITKDSNECDIEDAIVAVLVNEAVKEREMKLCTIDNDITLPNEIVVSHKDLNLTNLHKCLIFLGANLNKDLYDKSHFKDDYPRLGDNSQDVSLFKVKSYSKKNKIKTIQMTDVPSIWGDSSLGHRNYVLPPHYATITGCKAIMSHVTSLSMYNSSVNLHVLVRRNPILKEHMDQLLECFYSLFLWPLLLSNEGPIEIREAHLRKKDSAFLRPPALPVAPEVTINFDKYRKYQANGEEDIDLNEKTSRKKVITIEEPEGCSSKSSSSLLNSKADEIFE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -