Scos040492.1
Basic Information
- Insect
- Schrankia costaestrigalis
- Gene Symbol
- cnc
- Assembly
- GCA_905475405.1
- Location
- FR997855.1:1983254-2021580[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-12 4.9e-09 37.4 7.1 3 63 413 473 411 479 0.82
Sequence Information
- Coding Sequence
- ATGCGCTCTATGTCCGTCGAGCAGAGATGGCAGGACCTGGCTTCGTTGCTGACGATCCCTCCGCCACCACCGCCGGAGCAGTACCAGCAttatcaccatcatcatcaccatcaacACCCGCATAATATTAGTGCTCACGGTCCAGCTGGTGGCTACGCCCCGAACTATCACGCAGCCCTACCTGCTCCTCTGCCTGAGAAGCATCCTGATGCATATGcTGGTGCTACGGCTCCGCTAGATGGAGCTTACAAGGTGGAATCCGCGCAACATCCACAACAACACGATGGAATTTATTATCaaaatTCCACATCGGAAATGGCTGGCCCTGCAGCTACGAATCAAGATGGATTCTTGCAGTCGATTCTTAATGATGAAGATCTACAACTTATGGATATGGCTATGAACGAAGGAATGTACACGATGCGAATGCTGGACGGCGCCGGGGCCCATCACGTCCCCCATCACAATCACACACATATGATGATCACagAACGTGATTCAGCGTCAGACAGTGCCGTGTCTTCGATGGGATCCGAACGTGTACCCTCGCTCTCCGACGGCGAGTGGTGCGACGGTAGCGATTCCGCTCAGGAATTTCACAGTTCAAAGTTTCGTCCGTACGACGCCGCTTACGGGCGAGACCGCGCCGCCCCACACCAGCCACAGAAGAAACATCACATGTTTGGAAAGAGATGCTTCCAGGAACAGCCCGCCCCTCCCCCAATGGAGGTACCCGTACCTCGACCAGGAGTGGTGAAATACGAATGTCCCGAACAGGCCTATCATCATGAAAATATGCATAATATGCATACCGAATTCGGTGCTCGTCATCAATTACCGCCACCCCACGTAACAAGCTTACAACCCGCACTAGACCTAAACACAGCACATTCCAGTCACTCTTTACTACAGagTAACATACCTACAACGCCACCCCGCTTCACATATGCTACGCCGGAAAGGGTGAGACACAACCATACCTATAGTGCACCACTCGCGCCCGCAGACCAGCGACCCGCCGCAGTAAGAGATAAAAGAGTCCGTCGTCTCACAGACGGCAGTATGTCTGATGGTGGTTCTTCGGCAACAAGCAGTGGTCACCACCTCACACGAGACGAGAAGAGGGCGAAGGCGCTAGGTATACCGCTGGAAGTACAAGACATCATCAACCTGCCCATGGATGAGTTCAACGAGCGTTTGTCCAAACACGACCTGAGCGAGGCCCAGCTTTCCCTCATACGGGATATCAGGAGACGGGGGAAGAATAAGGTGGCAGCACAGAACTGCCGTAAGCGCAAACTGGACCAGATAACGTCCCTCGCTGACGAAGTGCGCGGCGTAAGGGATCGCAAACTTAGGACGCAACGCGATCGAGCTACGTTGCTGGCTGATAGGCAGAGAATGAAAGAACGATTCGCCGCGTTATATAGACATGTGTTTCagAATCTTCGCGACCCTGAAGGTAGACCTGTCTCCTCGCAGCAGTACTCGTTACAACAGGCGGCTGATGGCAACGTCGTGCTGGTGCCCAAGATGTCGCAACGTCAAGATCACCCAATGAACCGCACATCCGACGAGGACATGGACAGAAAAGCgaaacactacgagcagtga
- Protein Sequence
- MRSMSVEQRWQDLASLLTIPPPPPPEQYQHYHHHHHHQHPHNISAHGPAGGYAPNYHAALPAPLPEKHPDAYAGATAPLDGAYKVESAQHPQQHDGIYYQNSTSEMAGPAATNQDGFLQSILNDEDLQLMDMAMNEGMYTMRMLDGAGAHHVPHHNHTHMMITERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYDAAYGRDRAAPHQPQKKHHMFGKRCFQEQPAPPPMEVPVPRPGVVKYECPEQAYHHENMHNMHTEFGARHQLPPPHVTSLQPALDLNTAHSSHSLLQSNIPTTPPRFTYATPERVRHNHTYSAPLAPADQRPAAVRDKRVRRLTDGSMSDGGSSATSSGHHLTRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRGVRDRKLRTQRDRATLLADRQRMKERFAALYRHVFQNLRDPEGRPVSSQQYSLQQAADGNVVLVPKMSQRQDHPMNRTSDEDMDRKAKHYEQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039525;
- 90% Identity
- -
- 80% Identity
- -