Scos012519.1
Basic Information
- Insect
- Schrankia costaestrigalis
- Gene Symbol
- Xbp1
- Assembly
- GCA_905475405.1
- Location
- FR997832.1:18636585-18637918[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.8 1.3e+04 -2.4 0.0 16 25 32 41 30 42 0.73 2 4 3.1e-16 6.7e-13 49.7 7.3 2 52 46 96 46 97 0.97 3 4 3.1e-06 0.0066 17.7 1.5 28 55 86 113 84 118 0.91 4 4 5.7 1.2e+04 -2.4 0.0 16 39 136 159 133 163 0.76
Sequence Information
- Coding Sequence
- aTGAGCGCTCCTATCATCATCACTGTGCCGAACAACTACCTGGCGATGGACGAGATGGAGATGGATTCGAAGGTGTTGATCGACGCCTCATCTCCAGCTCCATCTAGAAAGCGTCGCCTGGATCATTTATCATGGGAGGAGAAAATGCAGAGgaaGAAGTTGAAGAACCGAGTGGCAGCTCAAACTTCACGAGATAGGAAAAAGGCAAAAATGGACGAGATGGAGTCAAGAATCAAGTATTTTATGAATATGAACGAGCGTTTAACTGGCGAAGTAGAGAATTTAAAAGCAATGAATGAGCGTCTGTTAAGTGAGAATGCATCGCTACGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGAGCCCCCAGACCAGCGGAGTCTGATCCTCAGCAGAAGGAAGGGCCCCCGCAGGCGATCCGCGCGGCGCGCCTGCTGCTGACGATGTGTCTCATCTCACAGACCTCCTCGCTCACTTCGACTCAGAAGAATAtctcgacaccctccatcaacTTGCAGACTCCCTCCTCAAAGAAATTGATGCAAGTGCTGCAGGAGCGACTCAAAATGAGCCAGTCCGGGGCGTTAGAGAATGCGCTGAAGGAGTTGAAGTGGTGGGGTCCACAACAAAGCACCTGGAATCCAGTGAAAGTGCAGTCATAG
- Protein Sequence
- MSAPIIITVPNNYLAMDEMEMDSKVLIDASSPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKYFMNMNERLTGEVENLKAMNERLLSENASLRSEAAARTVAGAPRPAESDPQQKEGPPQAIRAARLLLTMCLISQTSSLTSTQKNISTPSINLQTPSSKKLMQVLQERLKMSQSGALENALKELKWWGPQQSTWNPVKVQS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00869363;
- 80% Identity
- -