Sgig002610.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Schoenobius gigantellus
Gene Symbol
nfxl1
Assembly
GCA_963935595.1
Location
OZ012540.1:29470748-29473222[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1 8.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.0052 4.3e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 18 1.6e-07 0.013 17.6 15.9 3 19 186 202 185 202 0.95
4 18 2.3e-08 0.0019 20.3 13.1 1 18 237 254 237 255 0.94
5 18 0.66 5.4e+04 -3.5 1.8 6 10 280 284 279 284 0.89
6 18 8.3e-09 0.00069 21.7 11.8 1 19 290 308 290 308 0.99
7 18 1.8e-05 1.5 11.0 21.3 3 19 345 361 337 361 0.86
8 18 1 8.3e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 2.3e-06 0.19 13.9 19.0 1 18 395 412 395 413 0.97
10 18 4.1e-10 3.4e-05 25.9 12.7 1 19 422 440 422 440 0.99
11 18 0.0001 8.6 8.6 5.8 9 19 488 498 486 498 0.90
12 18 0.0095 7.9e+02 2.4 6.7 3 12 509 518 508 518 0.90
13 18 0.19 1.5e+04 -1.8 3.3 14 18 547 551 547 552 0.85
14 18 0.11 9.2e+03 -1.1 0.3 7 12 567 572 567 572 0.78
15 18 1.9e-05 1.6 10.9 4.4 1 11 588 598 588 599 0.97
16 18 0.00015 12 8.1 15.9 1 18 628 645 628 646 0.85
17 18 1 8.3e+04 -5.1 2.4 9 13 652 656 651 656 0.74
18 18 2.3e-06 0.19 13.9 11.1 1 16 687 701 687 707 0.92

Sequence Information

Coding Sequence
ATGGCTACTCGTTATAGAGATGTGGCTGCAAAGTTACAgcaaaatgtacaaaaacatTTGAAGGAAATGAAAGAACTTTCTTCTTCCGAGGATGAAGAGCCCTACGAGTCGAATGTCCTTGATGGTGTATTCCAATCGTATAAAAGCGGTGGTGGTGACATATATATGCTCGATCGCACCCGGCATCTCCTTGAAGAGGCTATAAGCGGCAGAGCTATTACTTGTCTAATTTGCATTTGTTCAATTAAACGTGTGGATCCAATTTGGACTTGCGATCACTGCTATTGTAATTTGCATATGTCTTGCATACAGAAATGGGCGAATGATAGTATTACTTTCAAAAGTGAAGAAACTCAAAGCTCTATAGCAGTGCTGGTCCAAAGGAAAATAGAATGGTGCTGCCCAAAATGTCGGAAATCATATGGTAAACATGAGATTCCACGGCGTTATCAATGTTTTTGTGGTAAAAGTGATGATCCACCATACCATCCTTGGCTTTTACCACATACGTGTGGAGAAGTTTGTGGAAAATTGCTTTCTAGTGGAGATAACTGCAAGCACAAATGCTTACTGCTCTGCCACCCTGGCCCATGCCCACCTTGCCCACAGACTGTAAATGGTGCTTGCTATTGTGCAAAAGAACGAAAACGAGTTCGATGCAGTGCTGCGTCATGGTCATGTGGACAACAATGTAGAAAAACCCTGTTATGTAATTCCCACAAATGTGAAACCATCTGCCACAAAGGTGAATGCCCTCCATGTGCATATGTAAGTGTACAGCCTTGCAAATGTGGCTTAGAAAAAACCGAACGCCCTTGCAATAACCCATCTTggcaatgtaaaaaagtatGTAACAAACCATTTTCATGTGGTTTTCACAAGTGTGAGATAAAATGTCATTCAGGAGACTGTGGAACATGCCCAAACTCGGGAATGCAATCATGTCCTTGTGGGGCACATCAAAAATTTGTACAATGCCCTGATGTTATAAAGACTTGTTTAGGCACATGTGGGAAAAAGCATGAACATTGTGAACACAATTGCCCAGAGAAATGTCACAAAGGGGCTTGCCCACCTTGCCAAGTTTTGACAGAGAAAAAATGTCTATGTTCTGCACACTCAAGAATGTTGCCTTGTAGTAAAGAATATAAATGTGAAACAAAATGTAGAGGTATTCGTCTATGTGGTAAGCATAGTTGTGGCCGTAAATGTTGCAATGGAAACTGCCCGCCGTGTGAAAAAGTTTGTGATAAACCATTACAGTGTGGTCGGCACAAATGTACAATGATATGCCACCGTGGACCGTGCTATCCGTGCCCACGAGAATCAAAAGTAACTTGTAGATGTAAGGAAACTTACATCTCTGTTTTATGTGGTAGAGAAAGACATACAAAACCACCTAAATGTGTTAAATTGTGTAAACTCAAATACAAATGTGGGCATTATGAAGAAAACAAACATGTGTGTCATTTTGGGACTTGTCCACCTTGTAAAGCTATTTGCAACAAAACATATCTGAGTTGTGAGCATAGCTGCAAGGCTATTTGTCATGAATATGTACCTGTTGTTTTCAAGCAAGTAGAAAAACCTGCTACTCCATGGGAAATCACTCCACCAAAGACTAAAATTATGACTTTAGAATGTCCACCATGTGAAGTGCCAGTTCCTATTGTCTGTTTTGGAGAACATGACACAGAAAAGCAACCCTGTCATTCAGCTAGAAGGCGTTGCTGTGGACGTACTTGCTCACGCCCATTGTTATGTGGAAACCATAACTGCTCATTAATGTGTCACTTATACACACAAGATCCTCAGTACCCAACTGTGCCTTATAATTGTAAGCAGTGTGAAAGAGACTGTAGTATGATCCGTCCGGTGAGATGTTCTCATAAATGTGCTCTACGAGGTTGTCACCCTGGACCTTGTCCGCCATGCGAAATATTAGAACGTGTTCCGTGTCACTGCGGACTCACTGAACTATATCTTCGCTGCCGTGAGCTCTCTACAGCTACTGATGAAATGTTGTCATGTAAGCTCCAGTGTCCAAAAAATTTAAGTTGTGGTCATCGTTGTAAGAGCACATGCCATTCTGGTGTGTGTGGTACTAATCAAATTTGCAATAAGAAAACGAAAATTCACTGTCCATGtggtaatttaaaaaaggaagctTCATGTAATTTGGTTAGGAATGGTGAGGCATCAGTCACATGTGACAATAGTTGCGAGACAAAGAAGCTGGCTGCCAAATTGGAAAAAGAGAAAGAAGAGCGTCAGTTAAGAGAACTAGAAGAGGAAAAAAATCGTAAAGAATTAGCTGAATATGAATGGAAATTGAGTGGTAAAAAGAAGAAGTATAAGGAGAAAAAGATTGTTGAGACAATAGACAATAGAAGTGTACTGCAGAAATACTGGATTCCTATTTTATCAGTTGTGATTACTGTGGCTGGTGCTGCTTATATGTTTGTAGAATTTTGA
Protein Sequence
MATRYRDVAAKLQQNVQKHLKEMKELSSSEDEEPYESNVLDGVFQSYKSGGGDIYMLDRTRHLLEEAISGRAITCLICICSIKRVDPIWTCDHCYCNLHMSCIQKWANDSITFKSEETQSSIAVLVQRKIEWCCPKCRKSYGKHEIPRRYQCFCGKSDDPPYHPWLLPHTCGEVCGKLLSSGDNCKHKCLLLCHPGPCPPCPQTVNGACYCAKERKRVRCSAASWSCGQQCRKTLLCNSHKCETICHKGECPPCAYVSVQPCKCGLEKTERPCNNPSWQCKKVCNKPFSCGFHKCEIKCHSGDCGTCPNSGMQSCPCGAHQKFVQCPDVIKTCLGTCGKKHEHCEHNCPEKCHKGACPPCQVLTEKKCLCSAHSRMLPCSKEYKCETKCRGIRLCGKHSCGRKCCNGNCPPCEKVCDKPLQCGRHKCTMICHRGPCYPCPRESKVTCRCKETYISVLCGRERHTKPPKCVKLCKLKYKCGHYEENKHVCHFGTCPPCKAICNKTYLSCEHSCKAICHEYVPVVFKQVEKPATPWEITPPKTKIMTLECPPCEVPVPIVCFGEHDTEKQPCHSARRRCCGRTCSRPLLCGNHNCSLMCHLYTQDPQYPTVPYNCKQCERDCSMIRPVRCSHKCALRGCHPGPCPPCEILERVPCHCGLTELYLRCRELSTATDEMLSCKLQCPKNLSCGHRCKSTCHSGVCGTNQICNKKTKIHCPCGNLKKEASCNLVRNGEASVTCDNSCETKKLAAKLEKEKEERQLRELEEEKNRKELAEYEWKLSGKKKKYKEKKIVETIDNRSVLQKYWIPILSVVITVAGAAYMFVEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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