Sgig073157.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- gatad1
- Assembly
- GCA_963935595.1
- Location
- OZ012563.1:22642307-22644473[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-09 2e-05 26.2 2.5 1 33 6 36 6 39 0.91
Sequence Information
- Coding Sequence
- ATGCCAAAACCTGTTTGCGTTCAGTGCAAAACAGCCGACTCCTTTCTCTGGAGGAGTTCAGAGACCGGACAGATTTGTAATGAGTGCCACTTATCCAATTCCACTAAGGAATCGAAATCTGAAGTTGTTAAGGTTGAGAATGATGAGAAAAAAGAGGAAAAGGATGAAAGCGAAAATAAAAAGCCCGACGGAGAGTCGACGCCTGCCAAAGCCACCGGGAAAGGTACAAGGAAGAGTACGCGTTCCACTCGCTACAAGCCGAAGGCGCCGGTACCGCCGATGTCCAAGCAGGGCGCACCGCGCGGCCGCGGCCGCCGGAGCCTCTTCAAGAGGCAGCCCGTCAAAGCCCCCACCGCCACTCCAACTGTGGTCACCAGTGACTCCGTATTTCATAAGGGCATTTACATGCAAGTAGGTGACATAGTGTCCATGATCGACTTTGATGGTGGCACTTACTATGCCCAAATACGTGGCTTTATGACTGACCAGTATTGTGAGAAGAGTGCCGTTGTCACCTGGCTCCTGCCAACTACAGCCAGCCCTCCGCCTGAAAAGGGCTTTGATCCAGCCACATACATCATTGGTCCAGAAGAAGAACTCTCTCGTAAGCTAGATGTGATGGAGTTTGTGATGCATGCACCATCAGACTACTACAAGTCCAATAGCAGCCCCTACCCACTCATCGACAGCGAAGTCAACAACTACACAGGATATATCTGGACCTCCTTAGATCCTACAGAAAGATCATAA
- Protein Sequence
- MPKPVCVQCKTADSFLWRSSETGQICNECHLSNSTKESKSEVVKVENDEKKEEKDESENKKPDGESTPAKATGKGTRKSTRSTRYKPKAPVPPMSKQGAPRGRGRRSLFKRQPVKAPTATPTVVTSDSVFHKGIYMQVGDIVSMIDFDGGTYYAQIRGFMTDQYCEKSAVVTWLLPTTASPPPEKGFDPATYIIGPEEELSRKLDVMEFVMHAPSDYYKSNSSPYPLIDSEVNNYTGYIWTSLDPTERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334432;
- 90% Identity
- -
- 80% Identity
- -