Sgig021604.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- GATA-B_1
- Assembly
- GCA_963935595.1
- Location
- OZ012544.1:379373-392653[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.58 8e+03 -1.3 0.1 22 27 76 81 74 81 0.80 2 2 1.8e-16 2.6e-12 48.3 7.5 1 34 223 255 223 257 0.97
Sequence Information
- Coding Sequence
- ATGCCTCGAGTGCGCCGCCGATCTGGCGGTCTCGTGAATGTCACGTTTCACGGTATCGTTGGCCCGCTGTCGCAAGCAGATAACTCCTCGCCAGCACGTACGGCGCCAGCGCTGGCCGTTTCACAACGCAATGAAATTCGAGCGATGTTTCTCAATTACGAGGAAAATGCTCTGCGCAAATTAAGCCACGCGACAAAGATAGTGATAAGAATCGTTATACCATTCATGTGTACGAGATGCGGCGGGGGCGGCTACGCGCGCTGCTCGTACGGCGGGGCGGCGCCCTATTCCTTCGCCGCCGCCGACATCGTGCACTCGCAGATTTGGAGCCCCAGCACCGATGGGTCGCCGCCGTacgcggcgggcggcggcgtgTCGCTGGAGGAGTACGGCGGAGGTGGAGGCGGTGGCGGCGGGGGTGGGGGTGGGGGAGGTGGGGGCGGGGGCGGCGAGGGTGAGGGCGGCACGCTGCCGGCGTTCGCGTCGCGCTTCAGCTtcggcgccgccgccgcgcggccGCCCGCCTACGCGCCGCCCACGCTCTCCGCCGCGCCCTACCATCACCAGGAGGTGTGggcgctggaggcggcgcggcgcccgCAGCTGTCCGCCGCCGCGAGCCTCTCCGCCATCTCGGTGGCGGAGGTGGTGACGGAGGGTCGCGAGTGCGTCAACTGCGGCACGGTGCAGACCCCGCTGTGGCGCCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTGGCCGCGCCCGCGACCGCCTCCGCCCACATAGTACGCATCTCTACGACCACCGCTCGCCCCGCTCACTTCGCGCTCACTGCGCGCTCACTGCGCTCACTGCGCTCACACCCCGCCCCGCTCACTGCGCTCCCGCTCACTGCGCCCCTCGCTCAGCTCACCGCTCACCGCTCACCGCTCACCGCCCCCGCGGCGCGGCGACCGGCGACGGCGTCTCGGAGGCGCCGCACCCCGCCGTCTGCAACTCGCCATCTATCGGGACGCTCCCAATCTGACAGCTGA
- Protein Sequence
- MPRVRRRSGGLVNVTFHGIVGPLSQADNSSPARTAPALAVSQRNEIRAMFLNYEENALRKLSHATKIVIRIVIPFMCTRCGGGGYARCSYGGAAPYSFAAADIVHSQIWSPSTDGSPPYAAGGGVSLEEYGGGGGGGGGGGGGGGGGGGGEGEGGTLPAFASRFSFGAAAARPPAYAPPTLSAAPYHHQEVWALEAARRPQLSAAASLSAISVAEVVTEGRECVNCGTVQTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPATASAHIVRISTTTARPAHFALTARSLRSLRSHPAPLTALPLTAPLAQLTAHRSPLTAPAARRPATASRRRRTPPSATRHLSGRSQSDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -