Sgig020540.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- GATA4
- Assembly
- GCA_963935595.1
- Location
- OZ012543.1:46789496-46818766[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-18 7.4e-14 53.2 3.1 1 35 394 427 394 428 0.98
Sequence Information
- Coding Sequence
- ATGAAAAACTCAGAAAGCCGGCAGGCCGCGGTCGCGCTTTTGTCAATCAAACACAACGACCCAACGAAATATACGGTGAAAAGAGAAGACGAGCCTCATATACTGTTCAAGAGCGTCCCAGGGCTGCCACCTCCCGAGAGAGCACGGGAGGTGATGCACTGCAATGCCGTTATCGACATTATAACAAAAGCTGTTGCAGTCGCACAGCGTGAAAATGAAGAATCTCAAAAGTTTCCCCCTAATTACCCTAGTGGTATAGATAGAACGCACGCTCTCAACTCCAACGACGTAAAATTCTCACACGAATACCACGAAGACCAGTATAGTAATACGTATAACTTGTCACGAAACACCACCAGCCCTAGTAGCGACGACCATGACAATAAAGAAATGGACCTCTCCTTGTACAGTTCAGTTAAGGGCGAGGTAGGGGAACAAAATGAAAACTCAGAACGCGATACAAATTCATTTTTCCAGTCTCTACTATCACAAAATAAGTCGTCAAATTACGCGGAAGAATATAACACTGCTGGTTTTGGTCGATCCTCTAGCAAGACGAATGCAGGGAAAGACAACTCATCAGTCTATGAGGATTGCAGCCAAAGCAGTAGCGGTTCGGACCCTGACCGATTACAAATGGATATTTCACAAATGTCGCAGGATGACCCAGAGGAAACGCAGTCAGCCCGGTCTACGCAGTCGTCGCCGCAGCCCCCTCTTGAAAACGAGACTGACAAGGAATCTCTATGGCAGGCACTACACAGACAAAATGGTCGAGGCGGCGAAGCGACGCAACTGCTAAAGCGGCTAATCAACAGCAAGCATTTAGGGATGACAGTGTCGCCATTGAGGGCTACCACATCACCTCTGCAGCAGCAGTTGAACGGAGCCGTATCACCGAACGGCGAGTGGCAAAACTCCGGCCGCTGCATAAGCGCGGCGGGTACGGCGCGCAGGAAACAGAGTTTTCCGGCGCGCGCGCAGCCCGCCGTGCCCGCAGACTCCCCCTCCGCGCCCTGGGCCCAGCAACTAACCGATAACCCGGAGTGCGCGGAGGGGCAGGCGGTCGCGACGGGCGGTcgcggcgggaccgggaccggggCGGGCGCGGGGACCGGGACCGGTGCGGTCGTGgggaccgggaccgggaccgcAGCGGGCGCGCGCGTGGAGCTGTCGTGCAGCAACTGCGGCACGCGCACCACCACCATCTGGCGGCGCGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCGTGCCGCGGCCGACGGCGATGCGCCGCGACACGATACacacgcgccgccgccgcccgagGCACGACGCGAAGCACTCGCGCACCAAGCGGcggagcggcggcggcggcgcgtgtGCGGACGGCGCGCCGGCGGAGGTGTCGCCGGTGCGGGCGGTCGCGGCGCCGGCGGTAGCGGTAGCGGGGGCGGGGGTAGGGGCGGTAGCGGGGGCAGAGGCGGCGGCGGACGACGGCATGCTCGCGGCGCTGCGGCGACAGCTGCAGCCGCACCTGCTGGCCGCGCTACACGCACACACCGCGCGCGCGCCCCGCACGCACCGCCCGCAGGTCGGTTTGAACGCGCCGGAGTACGACGAGGCGCCGCTGAACCTGGTCGCCAGCCACGTGGCCGCCGAGGAGACGCACTGA
- Protein Sequence
- MKNSESRQAAVALLSIKHNDPTKYTVKREDEPHILFKSVPGLPPPERAREVMHCNAVIDIITKAVAVAQRENEESQKFPPNYPSGIDRTHALNSNDVKFSHEYHEDQYSNTYNLSRNTTSPSSDDHDNKEMDLSLYSSVKGEVGEQNENSERDTNSFFQSLLSQNKSSNYAEEYNTAGFGRSSSKTNAGKDNSSVYEDCSQSSSGSDPDRLQMDISQMSQDDPEETQSARSTQSSPQPPLENETDKESLWQALHRQNGRGGEATQLLKRLINSKHLGMTVSPLRATTSPLQQQLNGAVSPNGEWQNSGRCISAAGTARRKQSFPARAQPAVPADSPSAPWAQQLTDNPECAEGQAVATGGRGGTGTGAGAGTGTGAVVGTGTGTAAGARVELSCSNCGTRTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHSRTKRRSGGGGACADGAPAEVSPVRAVAAPAVAVAGAGVGAVAGAEAAADDGMLAALRRQLQPHLLAALHAHTARAPRTHRPQVGLNAPEYDEAPLNLVASHVAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -