Sgig006855.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- RTase_7
- Assembly
- GCA_963935595.1
- Location
- OZ012541.1:5191335-5220155[+]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-11 2.1e-06 29.8 1.6 1 29 365 393 365 393 0.95
Sequence Information
- Coding Sequence
- ATGACAAACCTTCATGGTGTGAATAGTACCAGCACTGACAGCAGTTCAGGATCTACTTCAGATTCTACCAGTAGTGGTAGCTCTTCTACCAGTTCAGGTTCTGCTACTACTAGTTCAGATTCCGATTCATCCGCATCAGATGTGCCAGCAGCGAGTACCACAGCACAGCCAAAATCGCCTACAAAACCAGCTGAGGAAGCTAAAAAGAAGGAAGAGCCAAAGCAACAAAGGCGTCTATCCAAAGCTAACAAAATATCCTCATCTAGTGATGATGATACACCAAAAGTGGTTGAACCCAAACCTCTACCACCAAGGAGACGATGTTCAGCTAAACCTAAATCAGCTGCTGCAGTACTCGCTAAAGGCAAAACAACCCCTCGTGCAGCGGGAGCAAAGACACCTAAAGCTTCACAAAAATCTGCAAAACCTGCAAATAAATCAGATCAAAAGAAAAAGAGTATATTTTCTCCTGACAATAGTTCGGAGTCAGAGGCAGAAGGTAAAGAACCCAAAAGCCCTAAGGACTCGCCAAAGCCAAAAAGGGGATCAAGGAAATCTTCAGACGAGAAAGAAGCCTCATCTGTGACACCAACAGAGAATGAGGATAATAGCACTAAGGATAATGTGAAACGTAGAAGCAGTAATAGGTCAAGTGGCCCACCCCCAAAAAAGGCAGTAGAGGTAAAAAGTGCCTCATCATGTTCATCTAGTCAATCGTCAGCTGAATCTATTTCATCTGAGAGTGACAGTGAAGCAGCAAGCAAAAAAGACAGTTCTGTGAAGACTGGAAAAACAAAACCCCCATCCAACACTAGCAACAAGGACACCACAGAAAAATCTGGAGAATCAGGGGAAAACACAACAACATTACCACGAAAATTAACACGATCTCTGTCAGCTAGAGTTTCAAGATTAGCGACAATATCTAGGCCAACTAACACTGACACCGACTCTGATCCTGACGACAAGAATAATGATAGTAAAAGCAGTTCTGTTAGCAGCAACAAAGACAGTAAGAAAGGATCGAGAGGTCGTCCTGCATTAACCCAATCACCCAAGACAGTCCTACCGCCTCCAGAGCCATCAGAAAGGCGCTGCCACGTCCTGGGGTGTGACTCAACGGGTCACCTTGGCGGCAAGGCGGACAAGCACTTCACGTGGGACGCGTGCCCCACGTACCACAACGTGACGGGCGCGTGGTGCGTGGCGGCCGGCGAggagcgcgccgccgccgcgggcACGCGCCGCCGCGCGCTGCACGCGCTGCAGCACCGCCCGCGCTCGATGCCCACCATAGAGCAGCGCGCCTACCAGCTCAAGGTCAAGGTTATGGAGCGAGTCATAAACCGCCATTTACTGCAATACCTAGAGGACCACCAGCTTATTAGCgaccgccagtacggtttccgtcaTGGTCGCTCGGCTGGTGATCTTCTGGTGTATTTGACACACCGCTGGGCTGAAGCCTTGGAAAGGAACGGTGAGGCCCTCGCTGTCAGCCTCGATATCGCCAAGGCATTTGACACTGTCAAATGCCTTGGTCAAAAGTGCTctgtgccagaccctgtcaaattgacaggAATGGGGGAAAACGAACTTAGTACagttcaacccctcaaagacacaggtttgcccATTAGTGCCAAGAAAGACCGCTTTACATTAgcgcctcagttccaaggagtaacCCTTAAGATCTCCGATAGTGTTGGTATCCTCGGTGTTGAGACCACGAACAAAGTTCAATTCGGGAGTCATTTGGACAACAAGGCTAAGCTGGCCAGCAGGAAGCTCGGTGTCCTTAACAGAGCAAAGCGTTACTTCACGCCCTACCAACGCCATGTGCTTTATAAGGCccaagttcgtccgcacgtggagtactgCTCACATCTGTGGGCTGGAGCACCTAAATACCAACTTGATCCATTTGACTCTCTGCAAAGAAGGGCCGCTCGAATAATCGGTGATGCTAATCTATCGAACTCATTGGAGTCGTTGGGGTCACGGAGGGATTTCGGCTCcctctgtgtgttctaccgtctctttaacgTACTAGCGTCTAACATCGCTATTAGGGCTGCTCCTCACAACTGCCTCTCCAGGCCTAGTAATGAAGACTGGAGAAGAGCAGCGATGAATATCAGACCTAACAAAGTTGAATGGGCTATAGATTCATTCAAACCTTTTAAATCCGCGGGTGAGGATGATATCTTTCCTGCTCTGctacaacagggtaagaatATCCTTACTCCGGTTCTGGTAAAGATCTTCAGAGCTAGTTATGCCTGGGGATATATAccagaaaattggactatggtaAAAGTTCGATTTATTCCCAAGGCTGGTAAAAAGGACTACGCGCAGCCAAAGTCCTTTAGACCCATAAGCCTCACCTCCTTCCTACTGAAAAGTATGGAAAAGGTCATTAACGTGTGCATTAGAGACGGACCACTAAGAAAACGTCCTCTGCATGCAAAGCAGCACGCTTATCTAAAAGGAAAATCTACAGAAACTGCCTTGCTCGAACTAACCGACAAGATAGAACGGACTCTAGAAGATAAACAAATAGCCCTCTGTGCTTTCCTAGACATAGAACGAGCCTTCGATAACGTAACCATTGAAACCCTTTCCAaggcaatgggcgacaaggGGATTGATAAAACAACAACCCGTTGGATTGAATCGATGCTCCTTAACAGAATTATCAGTGTAAGTCTTCATGGAACAGTAAAAGGCTTCAAAACAACAAGAGGGTGTCCACAAGGAGGCGTCCTATCGCCACTACTGTGGTCACTTGTTATTGACCGCTTGTTAACTGAAGCCTCAGAAAAGGATTTAGATGTTCAGGGCTACGCAGATGACGTTGTAGCATGCGTCATTGGTCCCTGCCAAAGCACTGTCTCATATATACTACAAAAATCTCTTAACATCATCGATAGATGGTGCATTGAGAACAAATTGTCGGTAAATCCAAACAAAACGACGATAGTTCCCTTTACCAGAAAGTGCAAGCTAAACAAGCTGGTAAATCCTGTTTTAAGGGGGACTCAAATACCTTTTTCCACAGAAGTCAAATATTTGGGCGTTACGATCGACCAAAAATTGACGTGGAATAGTCACATTTACAATGTAATCCAAAAGGCAAAAAGTGCTTTAGGAATATGTTGTCGTTTGGCAGGAGCGAAATGGGGCATAAACCCAAAAATCGCCCTGTGGATGTACACTGCGATCGTCAGGCCTATGGTAACATATGCCTGCGTGGTTTGGTGGAAAAAAGTCACGCAAGTGACAGTTATCAACAAGCTAGGCGGTCTACAACGAACAGCTTGCCTTATGGTAACTGGCGCCATGTCTACAACCCCAGGAGCTGCGCTTAATGCCCTGCTGAATCTACCGCCCCTTCATCTATTTATAGTGAAGGAGGCGAAAGCTAGCATTTATAGAATAGAAAGCACTGGGAAGGTGGATGAAGACTGTGTATTTGAAAATGATATGGAGCTAGAGCCATCTATATCACCAGGGCCCACGCCGAATGCTACGTCTACATATTCGCGGAAAAGAAATGAGACAGACgaattaattgaaatatttgaagTTATGGAAAGTGCGAAAAAAAAGATGGATCAGCAGCAGAAGAGGGACTCGTTTGACGTTTATGGTGCATATATTGCTGCTGAATTGAGAAGTATTAAAGATGAACAAGCCGTAACGCAGGCAAAGTACGCCATTAATAGTATTCTGTACGAATTAAAAATGGGGCGGtataataatacttatgaaTATCAAACGGCGTCTTGTCATTCATCATCAACGCAAAATAATGTTGAGAAAACTGAAAGACGGAAAATTGAGAGACAGGAAACAAATAGACGAGAAGTAACACAATATGAAAGTGAAGATTCGGATATAGTAAACTTAGTTGACGATCTCAGTGATGAATCAATACAATAa
- Protein Sequence
- MTNLHGVNSTSTDSSSGSTSDSTSSGSSSTSSGSATTSSDSDSSASDVPAASTTAQPKSPTKPAEEAKKKEEPKQQRRLSKANKISSSSDDDTPKVVEPKPLPPRRRCSAKPKSAAAVLAKGKTTPRAAGAKTPKASQKSAKPANKSDQKKKSIFSPDNSSESEAEGKEPKSPKDSPKPKRGSRKSSDEKEASSVTPTENEDNSTKDNVKRRSSNRSSGPPPKKAVEVKSASSCSSSQSSAESISSESDSEAASKKDSSVKTGKTKPPSNTSNKDTTEKSGESGENTTTLPRKLTRSLSARVSRLATISRPTNTDTDSDPDDKNNDSKSSSVSSNKDSKKGSRGRPALTQSPKTVLPPPEPSERRCHVLGCDSTGHLGGKADKHFTWDACPTYHNVTGAWCVAAGEERAAAAGTRRRALHALQHRPRSMPTIEQRAYQLKVKVMERVINRHLLQYLEDHQLISDRQYGFRHGRSAGDLLVYLTHRWAEALERNGEALAVSLDIAKAFDTVKCLGQKCSVPDPVKLTGMGENELSTVQPLKDTGLPISAKKDRFTLAPQFQGVTLKISDSVGILGVETTNKVQFGSHLDNKAKLASRKLGVLNRAKRYFTPYQRHVLYKAQVRPHVEYCSHLWAGAPKYQLDPFDSLQRRAARIIGDANLSNSLESLGSRRDFGSLCVFYRLFNVLASNIAIRAAPHNCLSRPSNEDWRRAAMNIRPNKVEWAIDSFKPFKSAGEDDIFPALLQQGKNILTPVLVKIFRASYAWGYIPENWTMVKVRFIPKAGKKDYAQPKSFRPISLTSFLLKSMEKVINVCIRDGPLRKRPLHAKQHAYLKGKSTETALLELTDKIERTLEDKQIALCAFLDIERAFDNVTIETLSKAMGDKGIDKTTTRWIESMLLNRIISVSLHGTVKGFKTTRGCPQGGVLSPLLWSLVIDRLLTEASEKDLDVQGYADDVVACVIGPCQSTVSYILQKSLNIIDRWCIENKLSVNPNKTTIVPFTRKCKLNKLVNPVLRGTQIPFSTEVKYLGVTIDQKLTWNSHIYNVIQKAKSALGICCRLAGAKWGINPKIALWMYTAIVRPMVTYACVVWWKKVTQVTVINKLGGLQRTACLMVTGAMSTTPGAALNALLNLPPLHLFIVKEAKASIYRIESTGKVDEDCVFENDMELEPSISPGPTPNATSTYSRKRNETDELIEIFEVMESAKKKMDQQQKRDSFDVYGAYIAAELRSIKDEQAVTQAKYAINSILYELKMGRYNNTYEYQTASCHSSSTQNNVEKTERRKIERQETNRREVTQYESEDSDIVNLVDDLSDESIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -