Basic Information

Insect: Schoenobius gigantellus
Gene Symbol: -
Assembly: GCA_963935595.1
Location: OZ012545.1:1740719-1762483[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0058 1.5 11.5 3.0 1 23 87 110 87 110 0.95

2 7 0.16 40 7.0 4.6 1 23 1796 1818 1796 1818 0.97

3 7 8.1e-05 0.021 17.4 0.3 2 23 1824 1845 1823 1845 0.96

4 7 6.9e-05 0.018 17.6 1.8 2 23 1852 1874 1851 1874 0.93

5 7 4.8e-06 0.0012 21.2 1.8 1 23 1880 1902 1880 1902 0.98

6 7 2.6e-05 0.0066 18.9 3.1 1 23 1908 1930 1908 1930 0.99

7 7 5.2e-07 0.00013 24.3 2.6 1 23 1936 1958 1936 1958 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0058	1.5	11.5	3.0	1	23	87	110	87	110	0.95
2	7	0.16	40	7.0	4.6	1	23	1796	1818	1796	1818	0.97
3	7	8.1e-05	0.021	17.4	0.3	2	23	1824	1845	1823	1845	0.96
4	7	6.9e-05	0.018	17.6	1.8	2	23	1852	1874	1851	1874	0.93
5	7	4.8e-06	0.0012	21.2	1.8	1	23	1880	1902	1880	1902	0.98
6	7	2.6e-05	0.0066	18.9	3.1	1	23	1908	1930	1908	1930	0.99
7	7	5.2e-07	0.00013	24.3	2.6	1	23	1936	1958	1936	1958	0.99

Sequence Information

Coding Sequence: ATGACCAACACATGTATAGTGGACAACGTGGCTACACTACCCGACTCGATAGTAGAATTATCTCTAGAGAACACAGTACCAAAGACAATGTACCAACCGATGGACAAGCACATCCTGTACTCGTCCAGCGATAAGGCGCTCAACTACCCTAGCAATAAGATGCAGTATTCAATGGCCAGTATGGACAAGGAGGCCAGTGTGCCGACGTCGGAAGCGGAGAAGGCGGACCTATACGATACCCTAGACAAGCTGGAACTGTACAACTGCGGCAAATGCAACAAGTCGTTCCGGAAACAGAAGCAGTGCGAGGCGCATATAAAGGAGGCGCATTCGAGCGTGGCCAAGACTGAGGAGGGTTCCGGCTCAGGGTCCGGGTCCGGCGAGTTCAGCGAGCCCGAGGACCTGATGGCCGGCATACACGTGGCCGTGGAGCCCTACGAGCCCCCTCTGTTGCCGCACCTCACCGTGGACAGCGGGCACGTGCACCAGGACCACGTTCGGGCCTGGTCAGtggactacactacactacactacactgtactacactacactacacaccaCGCAGCTCTACGAGACGCCGCTGCTGCGTCACCTCACCGTGGACAGCGGGCACGTGCACCAGGACCACGTGCGGGCCTGCCCTACGAGACGCCGCTGCTGCGTCACCTCACCGTGGACAGCGGGCACGTGCACCAGGACCACGTGCGGGCCTGGTCAGtggactacactacactacactacactacactgtactacactacactacacaccaCGCAGCCCTACGAGACGCCGCTGCTGCGACACCTCACCGTGGACAGCGGGCACGTGTACCAGGACCACGTGCGGGCCTGGTCAGtggactacactacactacactacaccactgtactacactacactacactacacaccaCGCAGCCCTACGAGACGCCGCTGCTGCGTCACCTCACCGTGGACAGCGGGCACGTGCACCAGGACCACGTGCGGGCCTGGTACGTGAGAGGCTGCGGGGCGGAGGGCACGTACTGCCCGGTGTGTCCGGCGCCCGGCTCCCCGCACCCGGACCATCCGGGGCACCCGGATCACGCGGGGCACCCGGATCATGCGGGGCACCCCGACCACTCGGGGCACCCGGACCATCCGCAACACGCAGGGCACCCGCAGCATCCGAGCGAACACGGCGACCCTCACCACCCGCCCGACCACCATCTCAAAGAGGGGGGGCGTCCCCCCCTTTCGGGCTCCGGACAAGAGGACGAGCTCTTTCGACCGCGATCGTCGCTGCATCGGACTCCTCCACCGCGACGTATGGTTGTCGCTCCTGCGGACGATCAGATGACCACTCCGCCGTATCAACCTGCTTCGCCACCTAAGGAGGTGCTGGACGCTGCGGAGGCCGCCTACGCGGCTGTAATTCAGGCGCATTCCCCGAAGACCTCGCTGCCACCACCGGTCAACGCTGCAGCGGTCGCTGTACCTACTCCTGCTCCCGCTCCTGTTTCGGCTGCTATTGTCGCCCCGCCGCAAGTTCCTGAGGCATCTTCAAAGGGGAAAAGAGTGCTGTCTCCGGATCAGTGGACGGTCGTCGGCGCCCCCAAAAGGCGCCCATCGCGTTTAACCGCGTCCAGGATTCCACCCCCCGCCGCTAGGCGAGAGGTGGCCGCGCCCGCTACGGAGTATGGCACACCGTACACCACCACCGACGACGAGGAGATGGAGACGACGACGCTGGACAGAGCGAACGGGAGACGGCCGCTCGCCAAGGCGAATGGGGCCGCTCGCGCGATCGCCGCGGTGGCCGGGGCCAGCGGCAAAATGAATAAAACTGACTTGGCCGCCATCAACGCTGAGCTCGCGACCATCGTGGAGATCGTGGGGCACGTCACGCTGCTCTCTGAGCAGCAGCGTGCGGACATCGTGGCGCTCAGGACGACGGTTACCGAGCGCGAGGAGTCGTGGCGGCGGGACCGCGGCCGCGTCGCCAAGGCGGAGGCCGAGGCGTCGAGCGCGCGCGCGGACGCCGTTACGGCTGTGACCAGAGCGGCGGAgactgcggcggcggcggcggcggccccaTCGTCTGCGACATCGTATGCGGAGAGACTTCGCGCCAAGGTGTCCACAGGGCCGGTGGTGGCGCTGTATCCGGTGGAGGGGTCCGCGCTCAAGACGTCGGAGGAGCTTAAAACAACTGTAAAGACCTCTATTGCCCCCGCCGAGCTTCAGATCAAGATCGACAGGGTCCGTAGGGTGGGGAACTCGGGCGTCGTTATACAGACGAGGACTGCTGACGACCTCACAAAGTTGAGGGCGGCCCTCCCGAACACCATCAAAGCCAGCGAGGTTAAAGGCCGTCAACCACCGGTTGTTATTAGAGACCTCGAGGGAAAGGAGCCGTCTTTCAGCGAGACGATGGCGGCTGTCTATCAGCAAAACTTCGCGGACGACGTAAAATGGACTTGTGAAAAATTCGTCGGTAGCAGCCGTCTCGCCTTTAGGAAGGGCAGGATGGGGTCGTCGCAGTCCGCTATGGTGATTGCGTGCTCACCAGAGCTAAGAAGAGCCCTAATCGACAAAGGCCGGCTGTATATCGGATGGGAGAGTTGCAGGGTCGAAGATTTTACGACGGCTATCTGCTGCTCGAAGTGCGCAATGTACGGGCACAACGAGAAGAAGTGCCGACAGGAGTCGGTCACCTGTGCACGCTGTGGTATCCTGGGACACAAATCGGGGGACTTCGGCCAAATTAATCTGGCGGGGGCACAACTTGCCACATACGAGCTACCTCGTGTTGCTGAAGACCTGGGGCTAGACGTCGTTCTCGCTCAAGAACATTATCCTAGCATTCAGAGAGACGCTACCGCCTGCAGATTTCTGCAGTGCGGTACGAACGCCAAGGCGGCGATCTATATTCGTCGTCAAGACCTCCCATGCGCCTTCTTGCAACATCTGTCGAACACGCACTGCACAGTGTGCCATGTATTTGTCGACGAAGAAGGTGTCTATATGGTGTCCGCGTACTTCCAGTATAGAGACGATATAGACGTTCACCTACAACATCTCGGCGTTGTCCTCGATTCCCTTCGCGGGAAGAGAGTGATCATTGGGGTAGACTCTAACGCACACTCGCCGATGTGGTACTGTGAACCGCGGCAGTATACGGGGCGAGGGCCAGACGTCACGCACCGCCGTGAGCGCATGGAGGCGTTTATCCTGGCTCGAGGACTTAGGCTGGCGAACGCAGAGGGCGAGCCACCTACATTCGCAACAGCGAATGGTGCCTACAACATCGACCTCACACTGACGAGAGGCATCCTGGCGACAGGATGGCGAGTGTTGCCAGATCACATAGAGAGCGACCACCGGCTCATAACATTCGAAGTGGCAAGTCGGCCCACTCCTCGCGCTGAACCGCCTGGGGAGGAGCCGATGAAGCTGCGGGATCGTGGGGTCGATTGGGCACGTTTTGAGCGTGGGATCCATGGGCGGGTAGGAAGTATAAGGTGGAATCGGTCCGCCCAGGAGATCTGTGCTCAGTTCACCACCTTGGTAGGGAGCACCGCGAAGCAGACCCTGGGTGTCGTGCGTACGAAGTCGCACGGGCACGAGTGGTGGTCTCCACAACTTGACAAGCTGCGTAGGCGTAACAACCTTTTGCGTCGGACTTGGCAATCGACTCGCCGGGCCGGGGGGCTCGTCGAGGCCGAGGCCAAGGATCGATTCCATGCGCATAGGCGTTTATATAGGGGGGCCATGGAGGAGGCGCAACTTTTGCACTTTAGGAAAATCGCGGACTCGGGAAACCTGAACCCTTGGGGACAGGCGTACCGGCTCGCGAGCGGACGGCACAGACCGCCAAGTAATGTTATTAACGGCACGATTTACGCCGAAGGATATGCTGGTAGTGTGAATGAGGCCATGCACAGCCTCTTGTACTCACTTTGCCCGGACGACGATCTGTCCAGGGACACTCCCTATCACAGGCAGGTGCGTCTTATGGCCTCTATGTCACCTCCAGGAGAAGATGCGCCTCCTCCTTTCCAGGAAACTGTGAGGGACATAGTCCGGGATCTTCCCAACACGGCGCCGGGAGCCGACGGGATCAGTGCTCGCGTGATACAGCACACTTGGAAGGCCGCGTCGGCGGAGTTCTCCGAGGTGTTTAGGCGATGTGTCCGGGAGGGCTGTTTTCCGGATGTCTGGAAGGTCGGTAAGCTGATTGTCATCCCGAAAGGGAACGGCAAGCCCCTTACCGACCCGAAAGCATACCGCCTAGTTACTTTGTTGCCGATCTTTGCACGGATTCACTCGAGGCCGGTCGACGGTGTCTGCCCTAAACACCATCTTCAGGGCGGCGCGAGAGAGTTCGTCGAAGTATTTGCAGGTAGTTTTTCTGGATATCTCTGGGGCCTTCGACAACGCGTGGTGGCCGATGGTGTTGCTCAAGGTGAAGCAGGGGGGTGTCCACCAAACATTTTTAAGATGCTGGTGGACTACTTCCGTGAGCGTCACGTGAGCCTGTCCGTAGGTAATCACAAggtgtcgaaggcggcaacGATGGGTTGCCCGCAGGGATCGGTGCTGGGACCCACGCTCTGGAACGTGCTAATGGACGACTTGCTTCGACTGCCATTCCCTGGGGGGGTTAGCGTCGTGGCTTACGCCGACGACGTGACGATTCTGATCGAGGCCAATTCCCGGGCGAGCATAGAGGCCTCGGCCTCTACGACTTTGCAGCTCGTCGGCGACTGGGGGGCTCGTAATCGACTGGAATTTTCTCCtgccaagtctgcaactatgacgatcaggggaaaattccagaggccaccagtcatcaggttcggtgggacctcgatcagaagcgtcacgtcgACCACGGTGCTGGGGGTGGTAGTCGACGCAAGCTTATCGTTCGCACGGCATGCGACATCGATAGGGGAGCgggcggcaaattgcttcggcaaGATGTCGAGAGTGACGGCGTCCTCTTGGGGTATTCGGCACAAGGCGCTTAAAGTCTTGTACCAGGGCACCTATGTGGCGACGGTGACGTATGCTGCTGCATGCTGGTCAGAGCGCGCGTCCCTTCACGTTGTGCGGAGCGCGTTACtgcgcacccagagacccgccTTGATCCTTCTGACCGAGGCGTACCGCTCGACGAGCTCTGCCGCAttaccggtgttggccgAGGAGGTCCTGCAGAGGATATTCGAGACGGAGGTGTCGAACGGGGAGAAGTTTCCAGAAAGCGTGATGAACGCGCAGAGGCCTGAAGCTGAGGCGGGGGGTGACGGGGGAAGGGCTAGTGCGACTGCGGCGGTCAGCCAAGAAAACGCGAGTGGGGCTGCGAACGGATCCCGTCGCAGTAAGTCCACGCGTCAGTTCTCGTGCACGCAATGCGCGCGAGTTTTTCACCACCGCAACAGCTTAACGTACCACGCGCTGTCGCATTCCGGCAAGCAGCAGATGTGTCGCGACTGTGGCAAGAGCTTCTACACCGTGGCCGCTTTGAAGATCCACAAGCGGGTCCACAACGGGGACAAGCCGTGCAAGTGTGACGTGTGCGGCCGCGAGTTTAGACAGTGGAGCGACCTCAACTACCACAAAACCTCCATACACTCCAACCAGAAACACTTCAAGTGCGACTTCTGCGGCAAGGAGTTCGCGCGCAAGTACTCGCTGAATCTCCACCGTAAGATACACACGGGCGAGAGGAACTACAAGTGTGAATACTGCAACAAGAGCTTCCGGGCGTCCTCCTACAGGCTGAGTCACATGCGCACGCATACAGGCGTCCGTCCGTACAAATGCAACGAGTGCGAGAAGTGCTTCCGCGCGGCGAGTGATCTGCGCCGCCACATGCTCACGCACGAGAAGATGCGCACGCGCATGATGGCCGACGCGCGGCTCAGGAACAAACCCGCCGACGGAAGCGGAAAACACGCCGACGTGGCCGACGGAAAGCTCATTAAGTCGGAGATCGACGAGCGAACGTCGCCCAAGACGCCGAAGAAGCTGACCGTCGCCTCCACCGCTCGACCGCCCAACGTCATCAAGAGCGCAGACAAGAAATCGAAGAAGACGGCGGCCAAAAAAGGAGGCGCTCCCAACGTGACCGTCGGCCAGATGAAGGGCGACGCACAGTTCAAAGTGGCCGATTACGCTGTCGGCGATCAGGAGTTCGACACCCGGCAGATAGTGTACGCGGACCCTAATCCGGAGTACAGCAAGGCGGACTACAAATTGAAGGAGTACGAGCAGACGTACAAGGAGGAGAGGCTTATAGAGGTCAAGGACCTGGGCATATTCCGCAACGGGCACGCGGGGGAGGGGGAGAAATCGTCGGCGCTCAGGGACAACACGGACGGAAAGATGCAGATTTTCACGCACCTCGAGAGGCCGAAGGAGTACAGTCCGATAGTGACCCACTCCGTTTCCTTGGCGGAGCTGAGGGACGCCAGGGACGAACGCATCGATCCGCACGCGGAGAACATGGAGCATATGTTTTTGGAGAAGTTGACTGCCCTGTACAATATACCCGCGTGA
Protein Sequence: MTNTCIVDNVATLPDSIVELSLENTVPKTMYQPMDKHILYSSSDKALNYPSNKMQYSMASMDKEASVPTSEAEKADLYDTLDKLELYNCGKCNKSFRKQKQCEAHIKEAHSSVAKTEEGSGSGSGSGEFSEPEDLMAGIHVAVEPYEPPLLPHLTVDSGHVHQDHVRAWSVDYTTLHYTVLHYTTHHAALRDAAAASPHRGQRARAPGPRAGLPYETPLLRHLTVDSGHVHQDHVRAWSVDYTTLHYTTLYYTTLHTTQPYETPLLRHLTVDSGHVYQDHVRAWSVDYTTLHYTTVLHYTTLHTTQPYETPLLRHLTVDSGHVHQDHVRAWYVRGCGAEGTYCPVCPAPGSPHPDHPGHPDHAGHPDHAGHPDHSGHPDHPQHAGHPQHPSEHGDPHHPPDHHLKEGGRPPLSGSGQEDELFRPRSSLHRTPPPRRMVVAPADDQMTTPPYQPASPPKEVLDAAEAAYAAVIQAHSPKTSLPPPVNAAAVAVPTPAPAPVSAAIVAPPQVPEASSKGKRVLSPDQWTVVGAPKRRPSRLTASRIPPPAARREVAAPATEYGTPYTTTDDEEMETTTLDRANGRRPLAKANGAARAIAAVAGASGKMNKTDLAAINAELATIVEIVGHVTLLSEQQRADIVALRTTVTEREESWRRDRGRVAKAEAEASSARADAVTAVTRAAETAAAAAAAPSSATSYAERLRAKVSTGPVVALYPVEGSALKTSEELKTTVKTSIAPAELQIKIDRVRRVGNSGVVIQTRTADDLTKLRAALPNTIKASEVKGRQPPVVIRDLEGKEPSFSETMAAVYQQNFADDVKWTCEKFVGSSRLAFRKGRMGSSQSAMVIACSPELRRALIDKGRLYIGWESCRVEDFTTAICCSKCAMYGHNEKKCRQESVTCARCGILGHKSGDFGQINLAGAQLATYELPRVAEDLGLDVVLAQEHYPSIQRDATACRFLQCGTNAKAAIYIRRQDLPCAFLQHLSNTHCTVCHVFVDEEGVYMVSAYFQYRDDIDVHLQHLGVVLDSLRGKRVIIGVDSNAHSPMWYCEPRQYTGRGPDVTHRRERMEAFILARGLRLANAEGEPPTFATANGAYNIDLTLTRGILATGWRVLPDHIESDHRLITFEVASRPTPRAEPPGEEPMKLRDRGVDWARFERGIHGRVGSIRWNRSAQEICAQFTTLVGSTAKQTLGVVRTKSHGHEWWSPQLDKLRRRNNLLRRTWQSTRRAGGLVEAEAKDRFHAHRRLYRGAMEEAQLLHFRKIADSGNLNPWGQAYRLASGRHRPPSNVINGTIYAEGYAGSVNEAMHSLLYSLCPDDDLSRDTPYHRQVRLMASMSPPGEDAPPPFQETVRDIVRDLPNTAPGADGISARVIQHTWKAASAEFSEVFRRCVREGCFPDVWKVGKLIVIPKGNGKPLTDPKAYRLVTLLPIFARIHSRPVDGVCPKHHLQGGAREFVEVFAGSFSGYLWGLRQRVVADGVAQGEAGGCPPNIFKMLVDYFRERHVSLSVGNHKVSKAATMGCPQGSVLGPTLWNVLMDDLLRLPFPGGVSVVAYADDVTILIEANSRASIEASASTTLQLVGDWGARNRLEFSPAKSATMTIRGKFQRPPVIRFGGTSIRSVTSTTVLGVVVDASLSFARHATSIGERAANCFGKMSRVTASSWGIRHKALKVLYQGTYVATVTYAAACWSERASLHVVRSALLRTQRPALILLTEAYRSTSSAALPVLAEEVLQRIFETEVSNGEKFPESVMNAQRPEAEAGGDGGRASATAAVSQENASGAANGSRRSKSTRQFSCTQCARVFHHRNSLTYHALSHSGKQQMCRDCGKSFYTVAALKIHKRVHNGDKPCKCDVCGREFRQWSDLNYHKTSIHSNQKHFKCDFCGKEFARKYSLNLHRKIHTGERNYKCEYCNKSFRASSYRLSHMRTHTGVRPYKCNECEKCFRAASDLRRHMLTHEKMRTRMMADARLRNKPADGSGKHADVADGKLIKSEIDERTSPKTPKKLTVASTARPPNVIKSADKKSKKTAAKKGGAPNVTVGQMKGDAQFKVADYAVGDQEFDTRQIVYADPNPEYSKADYKLKEYEQTYKEERLIEVKDLGIFRNGHAGEGEKSSALRDNTDGKMQIFTHLERPKEYSPIVTHSVSLAELRDARDERIDPHAENMEHMFLEKLTALYNIPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -