Basic Information

Insect: Schoenobius gigantellus
Gene Symbol: TFDP1
Assembly: GCA_963935595.1
Location: OZ012546.1:19993866-20007365[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-07 9.4e-05 24.2 0.0 1 36 267 301 267 309 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-07	9.4e-05	24.2	0.0	1	36	267	301	267	309	0.90

Sequence Information

Coding Sequence: ATGTCCAATATATCTAGACGAAGACATGATTCTGGAAATGATCAACCTACAGAATATACAACAAAAAGACGCAAACACGCTGATAAAGTTGGCAAAGGGCTAAGGCATTTTTCAATGAAAGTTTGTGAAAAAGTAAGAAACAAAGGATTTACATCATACAACGAAGTTGCAGATGAGCTGGTCCTGGAATTTGGTGCTGGTCTTTATGGTTCATCAGATAATCAACAATATGACCAAAAGAACATAAGGCGAAGAGTGTACGATGCTTTGAATGTTTTAATGGCTATGAACATTATAtctaaagaaaagaaagaaataagaTGGTTGGGCTTACCAACCAATTCAGTGCAAGAGTGTACTgctttagaaaaagaaaaacaaacaaaactagATCAAATTCAAAAGAAGACACAACAGTTACAAGAGCTTATATTACAGCATATATCATTTAAAAGTTTGATAGAGAGAAATAAGGAAGCAGAAAACAAGGGCTTGAAACCCTCTCCATCATCAGCTATTCACTTACCATTCATTGTTGTGAATACTAGTGATAAGGCACTTATAGACTGCAGTATTTCTAATGAtaaAACGGAGtatatgtttaatttcaacAAAAGATTTCAAATTCACGACGACATcgatattttaaaaagaatggGCTTATTGTTTGGGCTAGATAAAGGTGAATGTTCGGAAGAAGATATTGAAAGAGCTAAGCAAATGGCACCAAAGTCATTAGAGTGCTATGTTGAACAAATGCCGAGGAATAGAGTACAAAACAGAAAAGTGGGTGGTCATACGCATGAGCAAATGCGTGATGCGCTGCAGGCCATTAAAGATGGCAAAAGTATCAGACAAGCTGCCGCTGACCATAAAATTCCATTCACAACACTCCAAAGGTACCAATTCAAATCAAAAGAAACGCAAGATCAACTCCCAAGATTGACACCAAACTACGCAGTAAACCAAGTATTTTCTATTGATCATGAGCTCATATTGAGAGATTATTATACAAAATGTGCAAACCTGTTCTATGGTTTGTCTGTTACTGACTGTAGACTAGTGGCCTATGAAATGGCGAAAATTAATGGCATCAAAATGCCAAAAAGTTGGACAGAAAACCGAATGGCTGGCTTGGATTGGCTGCGGGGTTTTCGTCAACGACATCCGGATCTGACACTGCGTAAACCTGAGGCGTGCAGCTTGGCCCGAGCATCAGCTTTTAACAAGGAAACTGTAAATAAGTTCTGTGATAATTTGGATAACGTAATCCGGCGCCATCCTGCTTTTTCTGACGGTACACGAATCTATAACTTAGATGAAACTGCGACCACTACTGTTCAGAAGACCCAACGGATTATGGCACCAAAGGGAAGAAGAAATCTTTGCAAGGTAACCAGCGGCGAAAAGGGGACACTTGTCACTACTTGCAACATCATAAGCGCTGGGGGGCAGGCTATTCCACCAGTCATTATCTTtccaagaaaaaatattaacccTCGCATGGGCGTTGGTACCCCACCTGGTTCACTGATTCTGGCAAATTCAACTGGCTGGATGAATAGTGAACTGTTTTTGGATGTCATGAAGCATTTCATACGAAGAACGGGGTCATCAAAAGATTACCCATCGATTTTGATAATGGACAACCACGAGTCACATCTTTCTATTGAAAGCCTGGATCTCGCCAAAGAAGCCGGTGTAACGGTACTTACGTTGCATCCACATACATCAGCGCGTCTACAACCACTAGATGTTGGAATTCTCGGACCATTCAAAACGTATTATTACTCCGCCATGAGTTCCTGGATGTTGCGCAATCCTGGATGTCCTGTTACTATTTATGATGTAGGCGCATTGATTGGGGAGGCTTTCGCAAAGTCTATGACACCGTCAAACATAACTCAGGCATTTAAAAAAACTGGCATTTTTCCTTTTGATCGTCATATTTTTAGTGACGAGGATTTTGCGCCTAGCACTGTTACTGACAGGCCAGAAAATATGCAACCTGAAGTTGTTTTCAGTATTGAACCCGCAATCTCTGACCGAGAACAGGTTTTAGAGCTAGCAGATAATTCATTGCGCCTTCAAACACCTGACGCTCCAACACCTGGCACTAGCACTGTCACTGCTGAAGAAACTCGTAATcgtacaatgagttcatctgggCTGAACATTATGGATGATAGTGAGTATCCAAAAAGTGCACCGATATTTACAACTCCAGAAAAATCAATACCAAATGGTCCAACAGGTGATTCACCACCTCCTCTTGATTTTTTTGCAAGACAACCTGGTGTTATTAGGCCCACTACAGACCCCATTATTACCCCGGATAATTTTCGAAAACCAATTAAAGCACCTGCAAGAACTGGAAAGAGGAAGCCAAGAAAATTAGGAAGAAGTCTTATAGCCACAGACACACCAGAAAAGAATGCCATTGCAGAACAAAAGTCAGGCAAACGAAAGAAAGAGACTAAATTTAAAGGGAAAAAAGTAAACCGTCCAGTGCTGCAAAGTGATTCAGAGGGTGATGATGAGAATATAATATTGAACGACGACACAGACGATGAAGGAGAATGGCTGGAAACTGAGGAAACCATCATAACAGAGGATTTGCTGACCAGGCCACTTGCACGCTTACCAAATGAAGGAGAATACGTATTAGTACAATTTTGTTCCAAGAACCAGAAGATATTTTACGTTGGTAAAGTTCTTGAAGAAAGGAATATCAATTCTTTGGAATTGTATGTTTCTTTCTTAAGGAACAAAAAGGGTAAGTTTGTTATGCCCGATGTACCAGACTTATCTTACGTGAAAGACGATGATGTTAGCTTTATTTTGCCTGCGCCGACCATTACTGGAAGTACTGCCAGACAACAATCTTATTATGTATTTCCTgtagatttaaataatattaacatcCGTTAA
Protein Sequence: MSNISRRRHDSGNDQPTEYTTKRRKHADKVGKGLRHFSMKVCEKVRNKGFTSYNEVADELVLEFGAGLYGSSDNQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLGLPTNSVQECTALEKEKQTKLDQIQKKTQQLQELILQHISFKSLIERNKEAENKGLKPSPSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFNKRFQIHDDIDILKRMGLLFGLDKGECSEEDIERAKQMAPKSLECYVEQMPRNRVQNRKVGGHTHEQMRDALQAIKDGKSIRQAAADHKIPFTTLQRYQFKSKETQDQLPRLTPNYAVNQVFSIDHELILRDYYTKCANLFYGLSVTDCRLVAYEMAKINGIKMPKSWTENRMAGLDWLRGFRQRHPDLTLRKPEACSLARASAFNKETVNKFCDNLDNVIRRHPAFSDGTRIYNLDETATTTVQKTQRIMAPKGRRNLCKVTSGEKGTLVTTCNIISAGGQAIPPVIIFPRKNINPRMGVGTPPGSLILANSTGWMNSELFLDVMKHFIRRTGSSKDYPSILIMDNHESHLSIESLDLAKEAGVTVLTLHPHTSARLQPLDVGILGPFKTYYYSAMSSWMLRNPGCPVTIYDVGALIGEAFAKSMTPSNITQAFKKTGIFPFDRHIFSDEDFAPSTVTDRPENMQPEVVFSIEPAISDREQVLELADNSLRLQTPDAPTPGTSTVTAEETRNRTMSSSGLNIMDDSEYPKSAPIFTTPEKSIPNGPTGDSPPPLDFFARQPGVIRPTTDPIITPDNFRKPIKAPARTGKRKPRKLGRSLIATDTPEKNAIAEQKSGKRKKETKFKGKKVNRPVLQSDSEGDDENIILNDDTDDEGEWLETEETIITEDLLTRPLARLPNEGEYVLVQFCSKNQKIFYVGKVLEERNINSLELYVSFLRNKKGKFVMPDVPDLSYVKDDDVSFILPAPTITGSTARQQSYYVFPVDLNNINIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01331223;
90% Identity: iTF_01331223;
80% Identity: iTF_01331223;