Sgig043762.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- arid5b
- Assembly
- GCA_963935595.1
- Location
- OZ012550.1:39353336-39376836[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-13 1.1e-09 40.7 0.0 3 89 255 323 253 323 0.87
Sequence Information
- Coding Sequence
- ATGAGCCGCGCGTGGTGTGTCCCCGACTCAAGTCCAGGGGCGTTGCACCGCATAGATCCGAGTCGCTATCAATTCGGCGCGCGTGTGTGCGTGTCACATGTCAGCATACAGGCTGATGTTTCGGACGAGGTGCTGGCCATCAACGACAAGGTGGTGGTCCGCGCCGAGGACCTGCTGAGCTGGGCGTGCGACGGCGCCGGCTGGCGCTGGGGGCTGCGGGCCGTGTGGCGCGGCGCGTGCGCCCCGCCGCCCCACCCGGACGCCACGCAGCCGCTGCACCACACCAAGCTGGACTTCACCGATGTCAACCGGGAGAAGAGCGCCATCGTGGACACGGAGAGTCCCGGTGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGCTACCGCGCGCTGCTGGCGCGGCTGGAGGGCATCCAGGCCGACTGGCTGCGGGACTCGCTGGTGGCGGCCCTGGGGGGGTACGCGGCGCCCACCACCAACACCAGGATACTGTACTGCAGGGACACGTTCGAATACCCCGAGTTGGAGGGCCATGAGTTCGTGTGCAACGAGCTGGCTCCAAAACTGAAGGGCCGGCCCCGGGGCAGGCGCCGCAGGGCCTCCCCCGGCGCCTCTGACGGGGACAATGCGTCCGGACCGGAGTCTGGACCGGAGATCACGCCGCCGTCCAAGATTCCGCTGACCCCCCGAAGACTTTCCCTACGAAATGGAGGGGAGCGGATCGAAGTCTCCGCCCAGGACGCGGACAGCAGACGGGAGGACAAGGCCTTCCTCGCGCAACTTCGGCAATTCCACCGGGACGGACAAATTTGTCCACCGAACGATCTGTCGCTACGTTCATTGTACTGCAACGTGAAATCGCGCGGCGGGTACGAGGTGGTGTGTCGACAGAGGCTCTGGCGGGAACTTAGCACCGACCAACCAGCGAGATCGAGGCGGCATTATGAGAGGTACCTATTGCCGTACGAGAGACACGAGACGAGAAACGGAGCTTGCCGCACATCGCACGCTCACGAGCCCAGCGCTGGGACTACGGTGGTTCTGGACTCACCCATTCATGACCTGACCGACAACGAACCGACGGAGGCAAAAGACGACATGAACTACGTTTCAAAACCTGCGGAGGAACTGAACCGGGAATTCCTAGAATCGTTGCCGAAGGAGGAGGAGGAGAAACCGGTTAAAACACCGGTGAAGCCAGAAAAACCGGTGAAGCTATCCCCGGATAAACCGGTGAAATTATCGCCGGAGAAACCGGTGAAGATATCAGTGAAGCCGGTCGAGAAACTGGTCGAACCGAAGAAGCTGTTCGAGGACGAGGTTGAGAAAAAACCGGCAAAGGTGGAGGCGGTGACGAACCATAAAGTTGATTGTGACAAACCGGACGGTGTCAGCAGTGAACTCCAAGGCTCCCTCTCGTCGCTCTCAGCGCTCGGCGACAAATATGTGAACGGCCACGATACACAGAAGAGCCGTCCAGCCGGCCGAAGCTCCTTGCGGGCGGTGCGAGTGAAACCCACCAGACCCCAGGCGAGGCCTCCCGCCGTCCCCCCCGCGCCTCTGGGCGTGAGATCGGAGGCCGCCAGTTCCCCGCACGCCATCAACAACTTCGGGATACATCGGCCCCTGCCGCCTGACGACGACATCGTCGAGGTGCCATATCAACCGAAAACGCCGGAGATCATCGATCTGGACGAATACCCGGAGAGCCCGCAGGGCGTCAAGAAGATGAAGCTGGACATCCTCAAGGAGCGGGGCCTGGAGGTGACCGCGGTGCCGGCGTGGACCCTGCCCCTCCCTCCGCCCCTCCCTCCCCCCCTCCCGCCCCCCCTCCTCGCCCCCCCGCCGGTCATCATCAACCCGGCCGTGCAGCACCAGATCCTCACGCAGGCGCAGCTCTTCCAGATGTACAACATCCTGCCGCCCCACTTCAACGGGCTGAAGCCGCCGAAAGTGATACAAGCCACCAGCATATACGGCACGAGCGGGCCCGAGAAGACCGTGTACGGGAACCCGAAGGACCCGTTCATGCCTCCCCCCCACGTGTTACTGGGCACCCCCCTGAAACCCACCAGGGCGGTGAGCGCGACAACCCCCCCGCGGGACGTCCTCGACCTGACCTGCAAAGTGAGCCCCTCGGTCGAGATCGTCAAGGTGGCCGATGCGAGCGCGCAGAGTGCGAAGAGCTACACGCTGCTCGACGGGAAGGCGGTCGTCGGGTCCAACCTGGAGATCACGCTGGTGAACAGGTCGCAGACGCCGGGCAGGTTCAGGGCGGCGCAGAAGAGGTCCTCCGACGGGAAGTTCGCGTCGAACGAGACCCCCACCCCGCCGCGGGAGCCGCCCGGGAACGCGTCCCTCAGCCCGCAGAAGGGCGCCATAGTGGTGCCCGGTTACCAGACGCAGCCGAGGGACGACGTGTCGCCGACCAGCTCGACGGGTTCCCGGGACAGCATGCCGGGAGTGTGCGGCGCGGGGCTGGAGGCGGCGCACGCGCTGGACCAGCGCCGGCTGCAGGCCTACCGGGACGCGCTCGCCTCGCACTTCAGGGGGTATTCAGGGCTGATGAGCCTGAGCGCGATGACCGGCACGCCGACCACAAAGAACTGA
- Protein Sequence
- MSRAWCVPDSSPGALHRIDPSRYQFGARVCVSHVSIQADVSDEVLAINDKVVVRAEDLLSWACDGAGWRWGLRAVWRGACAPPPHPDATQPLHHTKLDFTDVNREKSAIVDTESPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTTNTRILYCRDTFEYPELEGHEFVCNELAPKLKGRPRGRRRRASPGASDGDNASGPESGPEITPPSKIPLTPRRLSLRNGGERIEVSAQDADSRREDKAFLAQLRQFHRDGQICPPNDLSLRSLYCNVKSRGGYEVVCRQRLWRELSTDQPARSRRHYERYLLPYERHETRNGACRTSHAHEPSAGTTVVLDSPIHDLTDNEPTEAKDDMNYVSKPAEELNREFLESLPKEEEEKPVKTPVKPEKPVKLSPDKPVKLSPEKPVKISVKPVEKLVEPKKLFEDEVEKKPAKVEAVTNHKVDCDKPDGVSSELQGSLSSLSALGDKYVNGHDTQKSRPAGRSSLRAVRVKPTRPQARPPAVPPAPLGVRSEAASSPHAINNFGIHRPLPPDDDIVEVPYQPKTPEIIDLDEYPESPQGVKKMKLDILKERGLEVTAVPAWTLPLPPPLPPPLPPPLLAPPPVIINPAVQHQILTQAQLFQMYNILPPHFNGLKPPKVIQATSIYGTSGPEKTVYGNPKDPFMPPPHVLLGTPLKPTRAVSATTPPRDVLDLTCKVSPSVEIVKVADASAQSAKSYTLLDGKAVVGSNLEITLVNRSQTPGRFRAAQKRSSDGKFASNETPTPPREPPGNASLSPQKGAIVVPGYQTQPRDDVSPTSSTGSRDSMPGVCGAGLEAAHALDQRRLQAYRDALASHFRGYSGLMSLSAMTGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -