Schi008427.1
Basic Information
- Insect
- Schlechtendalia chinensis
- Gene Symbol
- gata5-b
- Assembly
- GCA_019022885.1
- Location
- CM032340.1:11385473-11391627[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-07 0.0035 17.3 0.1 8 34 235 261 229 263 0.75 2 2 2.1e-19 1e-15 57.4 3.2 1 36 330 364 330 364 0.98
Sequence Information
- Coding Sequence
- ATGTACTCGCAGAGGAGTAACAACGGCGTAGGTCTGTATCCGACCGCGCTACAACAGTACTTTACTTCTTCGCCCGAACACGTGCAACAACACCAGACCAACAACAACATTATCACGTCGGTGGCCGGCAATCACATGTGGTCCACGGTGGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGCGGAGGATTACCGGCTTTCGCCCAGCGGTTTGCTACGCACGCGTCGTCCGCGTCCGCGTACACGGCCGCCGGTTCGTCTAGGACCTCGGTGTCGTACCATCCGATCACCACGTCCGGCGTGATGCCCTATCATCTGACCGCCGCGGCCGTCAACAACTCGGGGGTCGCCGGCGGCGTCACGTCGGACGTCTCGACGCTCCAGTGGGCGGCCGTCGCTTCGCACGGTTACCCGAACACCGACGGAACAATAAACTACGTGCCCAACAACAGCCAGGCCAGGGGCCGGTCGAACGCATCGTTTTCCGCGGCCGCGTCCCTATCGGCCCTCGACCGGACGGAAATGTTGTTTTGCGAGGGTCGAGAGTTCTCCACGCCGTTGTGGAGGCGCGACGGCGACGGCCATCACTTGTGCGACGCCGCGCGCGGACTTCGCCATAAGGTGTACGGCGTGAACAGGAGGCACAGGCCCTTAGCGAAACATCCCGGACGGCTGGTCATGGCTTCCGGGCCGAATTCGTCCAGTTCTGGGGATTTCTATAAGGGTCCTCTGTATCATCATGTGCCCGCAAGTTTCACAAGGTCTGGAGCGAGCACACTCGAAGAGAAGACTACGAGAAGAATGCAAAACGCGTCCAGGCGTCAAGGGCTGCAGTGCACAAATTGTCAAACGGCTACTACGTCACTGTGGCGTAGAAATCAAGTAGGCGAGCCGGTGTGCAACGCTTGTGGTTTGTACTTTAAGCTACACGGCGTTAAGAGGCCACTTACAATGAAAAAGGACTCTATTCAGACGAGAAAGCGTAAACCCAAGGGAGGATCTAAAATGGAACCGGCGGAACCTAAGAGAATCAAACAAGAAATACCGTCTGAACACAACTATAGTGACAGTCACCGTACGTCCGGCAGTGTTTTAAATCATGGCAGTACCAACTCGGCTCTCGCGTATACCAGTCTATACCAAACGGCCGCACACTTAAGCCATCCATACTACGACGTTATAAAGTCAGAATCATCGCAAGAGTCCATCAATAGTCCACATATAGTAAGCCTAGCACCATCCAACAACAACAACAACAACAACAATAATATTAACACCAACAGCAAGGACAGACCTAGCGTTTTATCAATGTCTGTCATTTCCTAA
- Protein Sequence
- MYSQRSNNGVGLYPTALQQYFTSSPEHVQQHQTNNNIITSVAGNHMWSTVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGLPAFAQRFATHASSASAYTAAGSSRTSVSYHPITTSGVMPYHLTAAAVNNSGVAGGVTSDVSTLQWAAVASHGYPNTDGTINYVPNNSQARGRSNASFSAAASLSALDRTEMLFCEGREFSTPLWRRDGDGHHLCDAARGLRHKVYGVNRRHRPLAKHPGRLVMASGPNSSSSGDFYKGPLYHHVPASFTRSGASTLEEKTTRRMQNASRRQGLQCTNCQTATTSLWRRNQVGEPVCNACGLYFKLHGVKRPLTMKKDSIQTRKRKPKGGSKMEPAEPKRIKQEIPSEHNYSDSHRTSGSVLNHGSTNSALAYTSLYQTAAHLSHPYYDVIKSESSQESINSPHIVSLAPSNNNNNNNNNINTNSKDRPSVLSMSVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -