Basic Information

Insect: Schlechtendalia chinensis
Gene Symbol: -
Assembly: GCA_019022885.1
Location: CM032348.1:8957645-8962383[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00016 0.011 16.5 2.2 1 23 112 135 112 135 0.97

2 21 0.00035 0.026 15.4 2.4 1 23 176 198 176 198 0.99

3 21 5.7 4.1e+02 2.2 0.1 2 23 206 227 205 227 0.91

4 21 0.03 2.1 9.3 3.2 1 20 232 251 232 253 0.93

5 21 0.82 59 4.8 0.3 1 20 274 293 274 295 0.87

6 21 0.11 7.6 7.6 5.2 1 23 625 647 625 647 0.98

7 21 0.00051 0.037 14.9 1.8 1 23 653 675 653 675 0.96

8 21 0.0037 0.27 12.2 0.5 1 23 748 771 748 771 0.96

9 21 0.029 2.1 9.4 7.0 1 23 776 798 776 798 0.97

10 21 0.0013 0.091 13.7 5.2 3 23 852 873 850 873 0.95

11 21 0.0079 0.57 11.2 0.7 2 23 941 962 940 962 0.97

12 21 0.017 1.2 10.1 0.8 1 22 968 989 968 989 0.96

13 21 2.6e-05 0.0019 19.0 0.3 1 23 1043 1065 1043 1065 0.97

14 21 0.0016 0.12 13.3 7.5 1 23 1071 1093 1071 1093 0.96

15 21 0.049 3.5 8.7 1.9 1 20 1130 1149 1130 1151 0.94

16 21 0.097 7 7.7 1.9 2 23 1178 1200 1178 1200 0.95

17 21 0.0033 0.24 12.3 8.7 1 23 1275 1298 1275 1298 0.95

18 21 2.4e-05 0.0017 19.1 2.9 2 23 1305 1327 1304 1327 0.96

19 21 0.017 1.2 10.1 0.2 1 23 1358 1380 1358 1380 0.98

20 21 0.055 3.9 8.5 0.5 1 23 1385 1408 1385 1408 0.94

21 21 0.00018 0.013 16.3 1.3 1 23 1466 1488 1466 1488 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00016	0.011	16.5	2.2	1	23	112	135	112	135	0.97
2	21	0.00035	0.026	15.4	2.4	1	23	176	198	176	198	0.99
3	21	5.7	4.1e+02	2.2	0.1	2	23	206	227	205	227	0.91
4	21	0.03	2.1	9.3	3.2	1	20	232	251	232	253	0.93
5	21	0.82	59	4.8	0.3	1	20	274	293	274	295	0.87
6	21	0.11	7.6	7.6	5.2	1	23	625	647	625	647	0.98
7	21	0.00051	0.037	14.9	1.8	1	23	653	675	653	675	0.96
8	21	0.0037	0.27	12.2	0.5	1	23	748	771	748	771	0.96
9	21	0.029	2.1	9.4	7.0	1	23	776	798	776	798	0.97
10	21	0.0013	0.091	13.7	5.2	3	23	852	873	850	873	0.95
11	21	0.0079	0.57	11.2	0.7	2	23	941	962	940	962	0.97
12	21	0.017	1.2	10.1	0.8	1	22	968	989	968	989	0.96
13	21	2.6e-05	0.0019	19.0	0.3	1	23	1043	1065	1043	1065	0.97
14	21	0.0016	0.12	13.3	7.5	1	23	1071	1093	1071	1093	0.96
15	21	0.049	3.5	8.7	1.9	1	20	1130	1149	1130	1151	0.94
16	21	0.097	7	7.7	1.9	2	23	1178	1200	1178	1200	0.95
17	21	0.0033	0.24	12.3	8.7	1	23	1275	1298	1275	1298	0.95
18	21	2.4e-05	0.0017	19.1	2.9	2	23	1305	1327	1304	1327	0.96
19	21	0.017	1.2	10.1	0.2	1	23	1358	1380	1358	1380	0.98
20	21	0.055	3.9	8.5	0.5	1	23	1385	1408	1385	1408	0.94
21	21	0.00018	0.013	16.3	1.3	1	23	1466	1488	1466	1488	0.99

Sequence Information

Coding Sequence: ATGACTTCGATAAAAGACTACATCAACGTGGAACTCACTAATGAAAGTAATGAAGTTACCAGAGAATTATTTGCCAAAAATACAATTGAAAATCCTACATGGTATACAGTCAAAGATAATAATGTATCTTTAATTTCTGAAGATGTAGAGAGAGTTGTTAAGATTGAAACCGACATTTTGGACGACTGTATATGGGAGACTAGTATTGAAATTCCAAACGTTGTCAACAACCACAATAGTTTGTTGTCCTCCTTGGAATATCAGCTTTCAACACAAGTAATTCAGTTCAAGAACCACATGGATAAACATAAAAAACTGGCTGATGTAAATTATTATAAATGTGATTTTTGTGAAAAAACCTTTAAGTTAAACTTTGGCTTAAATAGACATATAGAAAAATATCACTTACAGAATAATGGTAACGGACACGAGAGTGGTAGTTTTGCTGATAAGCAAACTGACTGTATACTGAATTTGAAACTTTGCAAATTGAATGGTGTGTGGAAAAGTAAACCAAATTTTATGTACAAATGTAATGTTTGTTTTGAGAAATTTCACAGTGAAAATAATTTGACGGAACACATAAAAATTCATGACCAAAATAATGGACAAATACAATGCGAAGTGTGTCTAAAGGTTATATCAGTTTTTGAACTGAATTACCATATGAAATTGATTCATAGTAAAAATACATTTGCATGTTTGAAGTGCAACCTAAGGTTTGACAAAAAACAGAATTTAAAACGTCATTTTCATCGTTGTACAAAGCGTTCTCTCAGCAAGTTTCAAAGTAAACACAAGAATACTGTGAAGGCCTTGTTTGTTTGTACAGTTTGTAGAATTGGTTTTAGTAGTTCGTTTAGGTTGAAATTTCATATAATTTCGAGCTGTAAATACCGTCGTAGTTGTAAATACAATAGGAAAACATTCAGTGCAAAGAATTTGTGGTCGAAACACATGTATAAGTATGGTAAATACAAAAAGTATGTAAATGTTAATAAAACATCTATCAACGAAAATATGTTAAAAAATAATTGTCGTGTAGACATAGAAAATAGACACTGCACAAACATTTTAGAAAGCAGTAGTTCAAATAATATGGATTTAGGGACCAGCCATGAGTTGACTGTACAAGCTGCATCAATAGATAATGTACAAGTGAACAATTGTATTATGGAAGTAATGGAAGACAATAGCATGCATACAAATGTTATGAAAATCAATAATTCTCTTGGTGTAGATGGAGCGAACAGCACAGAAATTACTATGCAAATCGCAGCATGTAATTCAACCAAGAATAATAGTGACGGTTTAAGTATAAAGGGGAACGATGATTCATCATCATCCATCAATGTTGTAGAAAGAATATTTTCGGATCAAATAGATATGGAAAATAGTAATGAATCGGTTCTAGAGACATTATTACCACACAATTCAACTGTGAACAATTACAATGCGATTGTTGTAAAAATAGAACGAAACGAATTTGCGAATTTCACGGAAAGAAATGATTTGGGTAGTATAGGCATAGAAAATGATGGAGAATCAATAGAATCAATAGAATCAATAGAACCCAGTGTTTCTCACAGTTTTATGATCGATTATTGTCGACCTATAAAGGTGGAAAAAATTGTTTCTTTAAATGACACTGAAAGAAATAGTACAAATTGTGCAGCGAATGACATTGAATCGCCTGTTGTAATGACTGTACCAATGTCGAGGATTGTAAACATAAAACAAGAGCCCAATGATTTAGTTAATGATGACGCTGTAAGTATGACAAGCTCAGTTTCTCCAGTTTTATGTACCAGAAAGATGTCTAATACTGAAATTGTAGAAAGACCCGTCTTCGACGGACTTGGTACTATTGTATTTACGTGTAAAGTTTGTCATAATTCGACTAATGACCGACATACGTTTGCGTTGCATATGAGTAGTCACTCAAATAGCAACTTGCATGAGTGCGTTGTGTGCGATAAGAAATTTTCATCTGAATATCTTTGGCAAAAGCATTTGATGTTTCATCGAGAGAAGCAGTATTTAATTTTGATGTCTGGTTGGATTAGTGCCCAATCCAATAACAGTACCGATTTTACTCGTGCGAACATTCAAGCACATGATAATGCAATTTTTGAAAATAGAAGTAATCAAGTGACTCCTAAAATAAAACAAAAGTATAACAACTCCAATGCGAGTATTATGACGAATTTGAACAATGGGGCTAAATCAATTGAAAAACAATTCTTTTGTAGTATTTGTAAAAATGTATTTCCTTCCAAGTTAAAATTAATAGCGCATCAAACTACTGTTCATATATCATGTATGTTCTCCTGTAGACATTGTGATAAAATGTTTTCTACAAAGGCCTCATGCACAAACCACGAAAAGTCACATAAACTTAATACAAGCCAGCAGTCATTATTCAATACAATGGATAGCAGTCTCGAACCGATCGAAATTCCATATATCAAATTGGAAAATAATGATGACCAATCATTCAAACGCGTATATAAAAAGAAAAATAATGAATCGTTGAAAACAAACCAAACATTTTGTAATATTTGTAAAAGAAAATTTACCAAGCAGTGCTATCTGAATAACCATATGAAATTATTGCATAAAATAAATCCAAATTCGATCGAAGAACAGCAACAAGTGCTGTTGAGTAATTCAAATAATGTGAATGAAAACGTTAATATAAAGAATGAATGTATCAATACATCTAGAACTCTCGAAGAACGCAAAAAATGTCCATCAGTTGTTGTTGGGGACAAAACCTTGAGCAGCTCTCCTAATAACATTATTAGGGAAAAATCATCGTATTGCACTATATGTATGAAACAATTTGTACATATTGGTGCCTTGACCAGTCATATGAACATCCATTCTGGCCTTAAACCGTATGAGTGTCGGTATTGCAGTAGAAAATTTAGCATGAAAGGACCGTTTACCATCCATGAAAGAACTATGAAGTGTACTAGAGATGGACAACAACACTCATATAGTGAAAACTCCTTGGCCAAAAATTCATTACAAACAGAAAATTACAATTGCGAGGTTGTTGACAGTGTGTGCATAGAAGGTACGAATCTTACACATTCTGTCAAGAGGAAGAAACGCGTGTGGTTCATATGCGATGTGTGTGACAAAAAGTTCTCTACCCCGGACAGATTGATTATACACAGAAAGTTGCATCGTGGCAGCGAACCTTTTTTGTGCAAGATCTGTAATAAGTCGTACACTTACAGATGCCACTGGAACAGGCATTTGAAAACCCATTACTTAAAGAACATGTTGGTGAATAAACTGAAAAGCCATCAACAGACTGATAATGCAAATTTGGGCACCTACAATGTTAATGCCAATGTCATACAGCACGAAAACAAATTTAAATGTGTATATTGCAAAAAAGAATACAACTTGATGTCTCACTGGAAGAAACATTTGTCCCTGAACAAAGAGTGTCGCCGTCATGGTAAAATGAGTCTTGCGGCATTTGCGTCAACTAAGACCAAAAATGATATACGACGTAAATGTAAAATCTGTCTGAAAACCTTAAGCACGGCGTACAACTGCAAAGTGCACATGATAAATGTTCATAAACATTTTGATAAGGGGTGTTCGGACAATATGAATGTTGAAGGTGCAGATGGTGATATTATTGGTGAAGATTTTCACAATACTGATAATATTCATAATACTGACGCCGAAGATGTGGATGTGGGAACAATTAATCCCATATTGTTGAAACCTGTCTCGCGAAAACCGATAGCTTTGATAAGAAGAAGACGTCGTCAGCTAATTGCGAAAGATGAAAACAGACATGAGTGCGACATATGCAAGAAGAGTTACAGCAAAAAGACCAACTTGAGTAGACACCACAATCAATGTCATACGTTGAATGTATACGTCAAGTGCAACATTTGTGGAATGAATTTTAAACATAACTATTCCTATCAACAACACATGAGATTAAGACACAAAATATTAAAGGCAACCAGTGATAGTGACGTTGCTACGAGTATTACGGTGACAAATGTTGTATCGATGAACAAGAATTATATTGATAAATACTCTTGTGCAGTGTGCAAAATGACTTTTGCCGACGACAGTGTGTTCGAAGCTCATAAAAAAATACACGTCATGAATGGTCATGTGTGCAATTACTGCGAACAGCTATTCGAGACTAATGTTACTTTAGGCGAGCACATCTTGCAGAATCACTACGTCAACATCGCTGTAAACGACAATAACGAACGTGCCGAGAACAACGATTCAGTTATGAATTACTCGTCGTCTGCGGGATCCAGTGAATCCCAGCACGAGATTCATCCGAAAGTGTTGAAGACCGGCGCGCACTCCAACCACGCGAAACTGCTGTCCGGTGTCAAACTGTTCAAATGCGGCAGGTGTGACGCGGCCTTTAGATTCAAACAAAATTTGATAGTGCACAAGAGGAAACATTACCGGGAGGGCCGTCTGGCTGGAGAACATGAAGTGTTATCGTAA
Protein Sequence: MTSIKDYINVELTNESNEVTRELFAKNTIENPTWYTVKDNNVSLISEDVERVVKIETDILDDCIWETSIEIPNVVNNHNSLLSSLEYQLSTQVIQFKNHMDKHKKLADVNYYKCDFCEKTFKLNFGLNRHIEKYHLQNNGNGHESGSFADKQTDCILNLKLCKLNGVWKSKPNFMYKCNVCFEKFHSENNLTEHIKIHDQNNGQIQCEVCLKVISVFELNYHMKLIHSKNTFACLKCNLRFDKKQNLKRHFHRCTKRSLSKFQSKHKNTVKALFVCTVCRIGFSSSFRLKFHIISSCKYRRSCKYNRKTFSAKNLWSKHMYKYGKYKKYVNVNKTSINENMLKNNCRVDIENRHCTNILESSSSNNMDLGTSHELTVQAASIDNVQVNNCIMEVMEDNSMHTNVMKINNSLGVDGANSTEITMQIAACNSTKNNSDGLSIKGNDDSSSSINVVERIFSDQIDMENSNESVLETLLPHNSTVNNYNAIVVKIERNEFANFTERNDLGSIGIENDGESIESIESIEPSVSHSFMIDYCRPIKVEKIVSLNDTERNSTNCAANDIESPVVMTVPMSRIVNIKQEPNDLVNDDAVSMTSSVSPVLCTRKMSNTEIVERPVFDGLGTIVFTCKVCHNSTNDRHTFALHMSSHSNSNLHECVVCDKKFSSEYLWQKHLMFHREKQYLILMSGWISAQSNNSTDFTRANIQAHDNAIFENRSNQVTPKIKQKYNNSNASIMTNLNNGAKSIEKQFFCSICKNVFPSKLKLIAHQTTVHISCMFSCRHCDKMFSTKASCTNHEKSHKLNTSQQSLFNTMDSSLEPIEIPYIKLENNDDQSFKRVYKKKNNESLKTNQTFCNICKRKFTKQCYLNNHMKLLHKINPNSIEEQQQVLLSNSNNVNENVNIKNECINTSRTLEERKKCPSVVVGDKTLSSSPNNIIREKSSYCTICMKQFVHIGALTSHMNIHSGLKPYECRYCSRKFSMKGPFTIHERTMKCTRDGQQHSYSENSLAKNSLQTENYNCEVVDSVCIEGTNLTHSVKRKKRVWFICDVCDKKFSTPDRLIIHRKLHRGSEPFLCKICNKSYTYRCHWNRHLKTHYLKNMLVNKLKSHQQTDNANLGTYNVNANVIQHENKFKCVYCKKEYNLMSHWKKHLSLNKECRRHGKMSLAAFASTKTKNDIRRKCKICLKTLSTAYNCKVHMINVHKHFDKGCSDNMNVEGADGDIIGEDFHNTDNIHNTDAEDVDVGTINPILLKPVSRKPIALIRRRRRQLIAKDENRHECDICKKSYSKKTNLSRHHNQCHTLNVYVKCNICGMNFKHNYSYQQHMRLRHKILKATSDSDVATSITVTNVVSMNKNYIDKYSCAVCKMTFADDSVFEAHKKIHVMNGHVCNYCEQLFETNVTLGEHILQNHYVNIAVNDNNERAENNDSVMNYSSSAGSSESQHEIHPKVLKTGAHSNHAKLLSGVKLFKCGRCDAAFRFKQNLIVHKRKHYREGRLAGEHEVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -