Schi006619.1
Basic Information
- Insect
- Schlechtendalia chinensis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_019022885.1
- Location
- CM032343.1:15147751-15150794[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-18 1.9e-14 53.5 0.0 1 39 8 47 8 51 0.94
Sequence Information
- Coding Sequence
- ATGGCCGGACGGAAGACGTACACCGAGGACGAGCTGCAGGCCGCGCTCCGGGACATCCAGAGCGGCAAGCTGGGCACGAGAAGGGCGGCCGTCATATACGGGATACCGCGGTCGACGTTGCGCAACAAGGTGTACAAGATGGCGCTGGAACGGGACGGCGGCGGCGTCGGCGTCGGCGGCGTCAGGGACGCGTCCGCGGGCGCCGACGACCCGTGCAAAGTGGCGGCCGCGGAACTGTTGCCCATGCTGAGCATGGGCACGTACCTGTCGCGGTTGCTGTCCACGTCGGCCGTCGCCGCGTCGCCGTCGGCCGGTCTCGGTCGCGGCTCGCCGCGTTTGCCGGGGCGCGACAGTCCGCCGCCGCCGCCGCCGCCGCCGTTGCCGCTGCCGCCGCTAACGTCGGCCGCACCGCCGCACCCGCAAGACTTTCTCAAAGGGTTCACCGTGACGGAGATAATGCGCAAGATACTGGACGACGAGCAACAGCTGCAATACGGCAAGTCGATGGATCCCAGACGGTGGTCGTCGTCCAACGGTTTCGGCCCGTCCGAACCGTTGATGGACGCGGCGGGCCGGAGCAACGACGACGACTCGAACCCGTCAAACGTCATACTGCGGATACCGTCGTACAAGTCCGTTCCCGGCGCTAAGGCACCCGATTACGATCCGTCGGGCTGCAGGGAACTCAGGTCCCCCGGGCGGCCCAACAGCGTCAGGAGCGACACGTCTTCGCCGCCGTCGTCGTCCGGCGGCGGCGGCGGCGGCGGCGGAAAACTTCCGGTCAAGGAGAGGCACCTGATGCGGCCCAGGAAACGCGAGCCCAAGAACCCGGCGTCCGCGTCGTCGGTGTCCACCGCGACGGCCGTCGCCGAACAGGAGGCCCGTAAAAAGTCGTCGTCGTCGTCGTCCGACTTGTCGGCGGCACGACCGTCGGCGGCGGCGGCGGCGGCCGATCACCACTTACAGGCGTCGTCGGCCGCACCGCCAGCCGTCAAACTGCCCGCGCACGTGTTCCCGTCGCAACAGCCGTCGCCGTTGCAGCAGACGCCCAACGGGCTGAAAATGTTCGAAGCCGCGTCGTCCCCGGTGGCCGGCCCGTACCAGCCGTCGTTCCCGTTCTGGGCCCCGAGCCCGTTCCACGTGCCCCTGGATTTCCAGCGCAACCCGGTGCAAGCGTTCACGTCCATGTCGATGATGCAACGCATCCAAGCCGAGTCCCGGCTGCACCAGCACCATCAGGCCGCAGCCGCGGCCGCGGCCGCGGCCGCCGCGGCGTCCATCGCGAGCCTGGGCAAAAACCCTCGCGAGGTGGCCGAGAACCTGTACGACGGGACGGACAACGGCAGCTTCCTGGACGGCATAATACGGACGTCACCGCCGCCGCCCGGCCGCGCGACCACCGACGCGCACCACGACGACGACGACGACGACGATCTATAA
- Protein Sequence
- MAGRKTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKMALERDGGGVGVGGVRDASAGADDPCKVAAAELLPMLSMGTYLSRLLSTSAVAASPSAGLGRGSPRLPGRDSPPPPPPPPLPLPPLTSAAPPHPQDFLKGFTVTEIMRKILDDEQQLQYGKSMDPRRWSSSNGFGPSEPLMDAAGRSNDDDSNPSNVILRIPSYKSVPGAKAPDYDPSGCRELRSPGRPNSVRSDTSSPPSSSGGGGGGGGKLPVKERHLMRPRKREPKNPASASSVSTATAVAEQEARKKSSSSSSDLSAARPSAAAAAADHHLQASSAAPPAVKLPAHVFPSQQPSPLQQTPNGLKMFEAASSPVAGPYQPSFPFWAPSPFHVPLDFQRNPVQAFTSMSMMQRIQAESRLHQHHQAAAAAAAAAAAASIASLGKNPREVAENLYDGTDNGSFLDGIIRTSPPPPGRATTDAHHDDDDDDDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -