Basic Information

Gene Symbol
grh
Assembly
GCA_019022885.1
Location
CM032347.1:7240763-7268807[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-63 1.2e-58 198.5 0.0 26 221 526 716 512 718 0.93

Sequence Information

Coding Sequence
ATGGCCGATTCGGAAACGAACGGTGCCGTCGGCGGTGGCGGTGGCGGTGGCGGCGGTGGCGGCGGCGGCGTCGGCGGCGTCGGCGGCGTGTCCGAACAGCCGGCCGAGCCGGGCGGCTGGAGGCCGTCGTACTACGAGCACCCGCTGACCGCCGCCACGTCGGCCATGCTGAACATATCGGGCGGCGGCGCCGACGAACAGGGCCAGCAACAGTCCGTTGTCCAGGGCCAGGGGGGCGCGCCGCTCAGTTTCGTCTACGAGTATTACAAGCTACCGCACCTGACCGCGTCCGACGCCGTCGTCAAGGACAACAAGCAGCTAGCCGACATATGGCCAACGACGTCGTCGCCGAACGGTTCGCTGTTGCCGTCGCAACTGAAACCGTCCAACGGGCTGATCGGCACCGGCGCCGGCGGACTGGAAATCGGCGCGGGACACCTGAGCGACTTGCAGGGACTGTTCCTGCACCAGCAGCAGCAGCAGCAGCCACTGAAGCGCGAGCCGGAGGACCTGAGCCATCATCACCGCGGCGGGCCGAACAACAAGGGCGGCGGCAATGCGGACGGGCTGAAGACCATCGGCGGTGGAACGGGACGTCCCAAAATCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCGGTGGCGTAGTCGTGCAGGTGGGCAACGTGAAGGAAGAGTACGGCGCCGGACACCACTCGCCGCAGCACAACAGCCGGTCGATAAACGGCACGCCGTCGTCCACGTCGTCGCTGATCGCCGAGATGAACCCGCCGGCGGCGGCCATCGAACTGATCGCCACGCCGGACGGCCTGAAACCCATGTACGGCACGCACATATTCACCACCATGTCCGGACAGCACGCGGACAGCGGCGCGCCGTCGCCCAACTCGTACGAGCACCAGCAGTACACCACGTCGTCCGTGCTGTCCGGCGGCGGCGGCAACCCGGGCGGCTACATCACCACGTCCACCGGCCGCGCGCCGTTCGCCGACCCGTACGCTTACCGCGAATATTTCGGCGGCGCCGGCGCGGCCGCGGAACCCGGCCCGTACGGCGCGCAGCTCGGAGGCGGCGGCGGCGGCGGAGGCGCCGGCCGGCAGACCGCGTCCTACGGCAGCGACGCGTCCGACCCGGGCGCCGTGTCCAACGCCGCGGCCACCGCGTCGTTCGTCGAGCGGTACGTCCGGCAGAGCTCGTACCACAACAAGGGCGTCATCGCCGCGGCCGGGCTGACCGTCGACCTGCCGTCGCCCGACAGCGGCATCGGCGCGGACGCCATCACGCCGCGAGACCAGAACGCCATCCAACAGTCGTTCGACTACAACGAGATGTGCCAGACGCCGAGCATGCTGGGCGAACACCAGGCGCAGCGGATGTCCACGGGCGGACGGTCGAGACCGTGGCACGATTTCGGCCGGCAGAACGACGCGGACAAAATACAAATACCGAAAGTATTCTCCAACTACGGGTTCCGCTATTATTTGGAATCGCCGATCTCCACGAACCAGAGACGCGAAGACGACCGGGTGACGTACATCAACAAGGGCCAGTTCTACGGCATCACCATGGAGTACATACCGGACCCGGACAAACCGCTGACCAGCCAGACGGTCAAGAGCGTGGTCATGTTGATGTTCAGAGAGGAGAAAAGTCCAGACGACGAGATCAAAGCGTGGCAGTTTTGGCACGGCCGACAGCACAGCGTGAAACAGCGAATTCTCGACGCCGACACGAAAAACAGTGCCGGTCTGGTGGGGTGTATCGAAGAAGTATCTCACAACGCCATCGCCATCTATTGGAACCCTCTGGAGAGTTCGGCAAAAATCAACGTCGCGGTGCAATGTCTGAGTACGGACTTCAGCAGCCAAAAGGGCGTAAAGGGCTTACCTCTGCACCTGCAAATCGACACCTACGAAGAACCCAGAGACGGACCCGTGTACCACAGGGGATATTGTCAAATCAAAGTTTTCTGTGATAAGGGAGCCGAAAGGAAGACCAGGGACGAAGAGCGGAGGGCGGCCAAACGGAAAATGACGGCCACCGGGCGCAAGAAGATCGACGAACTCTATCATCCGCCGTGCGAACGGTCCGAATTCTATTCGATGAGCGACCTCAACAAACCGCCGGTGCTGTTCTCGCCCGCCGAAGACATCGACAAGCTGACGTCGATGGAGCTCCAAGGGTTCTACGGGCACGACACGGACACGTCCAGTCTGTCGAACGGCGAACCCGGCTCGCTGAAGCACTCGTCGCCGTTCCTGTTGCACTCCGGCGTGGCTAACAAGCCGGCCGGCACGACCACCACGCAAACGCTGAAATTCCACAATCATTTCCCGCCGGACACGCACAACGTGTCTTATTACAACAGCGAGAAGAAAGAAGTGCAGCTGGACCAGAGCGGGCTGACCACGGACGGTACGGTGTTCTCGAGTCCGCCCAACAAGCGGACGAAACTGGTGCCGCCCATCAACGAGCGGGTGATGTTGTACGTGCGGCAGGACGCCGAGGACGTGTACACGCCCCTGCACGTCATACCCCCGACGACCCAGGGACTATTGAATGCTATTGAGCATAAGTACAAAATTTCTGCTTCCAGCATTAATAACGTGTATCGAAAAAACAAAAAAGGGATTACGGCCAAAATTGACAACGACATGCTCAAATATTACTGCAACGAAGACTCGTTTCTGTTGGAAGTCAGACACGCCAAAGAAAATGAGAACTTGATCGATCTAATAATGGTTGAATTCATCGATCACTGA
Protein Sequence
MADSETNGAVGGGGGGGGGGGGGVGGVGGVSEQPAEPGGWRPSYYEHPLTAATSAMLNISGGGADEQGQQQSVVQGQGGAPLSFVYEYYKLPHLTASDAVVKDNKQLADIWPTTSSPNGSLLPSQLKPSNGLIGTGAGGLEIGAGHLSDLQGLFLHQQQQQQPLKREPEDLSHHHRGGPNNKGGGNADGLKTIGGGTGRPKIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVVVQVGNVKEEYGAGHHSPQHNSRSINGTPSSTSSLIAEMNPPAAAIELIATPDGLKPMYGTHIFTTMSGQHADSGAPSPNSYEHQQYTTSSVLSGGGGNPGGYITTSTGRAPFADPYAYREYFGGAGAAAEPGPYGAQLGGGGGGGGAGRQTASYGSDASDPGAVSNAAATASFVERYVRQSSYHNKGVIAAAGLTVDLPSPDSGIGADAITPRDQNAIQQSFDYNEMCQTPSMLGEHQAQRMSTGGRSRPWHDFGRQNDADKIQIPKVFSNYGFRYYLESPISTNQRREDDRVTYINKGQFYGITMEYIPDPDKPLTSQTVKSVVMLMFREEKSPDDEIKAWQFWHGRQHSVKQRILDADTKNSAGLVGCIEEVSHNAIAIYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTYEEPRDGPVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKIDELYHPPCERSEFYSMSDLNKPPVLFSPAEDIDKLTSMELQGFYGHDTDTSSLSNGEPGSLKHSSPFLLHSGVANKPAGTTTTQTLKFHNHFPPDTHNVSYYNSEKKEVQLDQSGLTTDGTVFSSPPNKRTKLVPPINERVMLYVRQDAEDVYTPLHVIPPTTQGLLNAIEHKYKISASSINNVYRKNKKGITAKIDNDMLKYYCNEDSFLLEVRHAKENENLIDLIMVEFIDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00308602;
90% Identity
-
80% Identity
-